| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3108 |
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| Symbol | |
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| ID | 8117806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 3542590 |
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| End bp | 3546273 |
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| Gene Length | 3684 bp |
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| Protein Length | 1227 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644853485 |
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| Product | SMC domain protein |
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| Protein accession | YP_003005409 |
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| Protein GI | 251790688 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.885936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTC TTAGCCTGCG CCTGAAAAAC CTCAACTCGC TGCAAGATGA GTGGAAAATC
GACTTCACGC GCGAGCCTTT CGCCAGTAAC AGCCTGTTCG CCATCACCGG CCCGACCGGT
GCAGGTAAAA CCACCTTGCT GGACGCCATC TGTCTCGCGC TGTACCACCA GACGCCGCGT
TTGAAGGTCA GTCCCGGTCA TAACGAACTG ATGACGCGCC ACACCGCTGA ATGTCTGGCG
GAGGTCGAGT TCGAAGTTAA AAACGTCGCC TACCGCGCGT TCTGGAGCCA GCGCCGCGCG
CACAACAGCC CGGAAGGCAA TTTGCAGCCC CCCAAAGTGG AACTGGCGCT GTGCGCCGAC
GGCAAAATCC TTACCGATAA AGTGAACGAC AAGCTGGCGA TGATAGCCGA TATCACCGGG
CTGGATTTCG ATCGTTTCAC CAAATCGATG ATGTTATCCC AGGGGCAGTT CGCCGCCTTC
CTCAACGCCG ATGCCAATCA GCGGGCGGAG TTGCTGGAAG AACTGACCGG CACCGATATC
TACGGCCAGA TTTCAGAACG GGTATTCGAA AGGCACAAAG AAGCACAGAG CCAACTGGAG
ACTCTGCGGG CGAAAGTCGC CACGCTGGAG CTATTGAGCG ATGAACAACG CCAGGCACTG
GAACAGCAAC TGGACGCCAT CCGCCAGCAG GAACACTCGT TATCGATACA CCGGGAAGAA
GTGCTGGCGC ACCAGCGTTG GTATGACTCG CTGCTGCAAC TCCAGCAGAC GCAAAAGCAG
GCCCTGCAAC AGCAATCCGT GCATCAACAA TTACAGCAAC AATCGCAACC GCAATTAGAT
AAGCTGCAAC GTAGCGAACC GGCGGAAAAA TTGCGCCCGC TTTATGATGA GCGCGGGCGC
GCGCAACGGG AAAAACAGCG GCTGAATCAA CAATTAACCA GTGTTCGCCA GCAAATCGGC
CGCCAGCAGG ACGCCATGAA CCAGTTGAAA ATACAGCTGG AAAAAGCGCT GTCTACCCGC
CAGCAACACG CCGAACACCG CCAACAGCAA GAGACATTGA TCAACGAGCG CATTCTGCCG
CTTGACCACC ATATCGCCAC CTTGCAGACG CAGCGCGCCC AGCAGCAACA GGCGATAGAT
AGCCTGATTG AACAACAAAA GACGCTGATA GCCGGCCTGG CCAGGCTACA ACGCCAGCAA
GAACAAACAC GGCTGCGGTT GGAGGAGATA GAAAATTATC GTCGGCAGCA TAGTCGCCAC
CAGCATCTGG GCAGCCATAT TCCCTTGTGG CAAGCGCAAT TCCCCCAGCA ACTGAAATGG
CAGCAGGACC TGCACGTGGT GCAGGAAAAA GCGGCGCAAC AACAGATTCA GGCGGAATAC
CTTGACCAGC AGCGCACGTC GCTGGTCGAA AAACAACAGG CGCAACAGCT CGCCTGTGAA
CGCGCCCGGC AACGGCTTAA CGAGCATCTG CAACAGGATG AACAACTGGA AGCGGAGTAC
CCGCTGGCAA ACCTGCGTCA GCAGTTAGCG CGGCGTGCAG CGGAACGGCC GGATCGCCAG
CAACTGGCGA CCAGCGCCGC CGTACTGCAA CAGTTAATCA GCCAGCGTAC CTTGCTGGAA
GTACAACAGT TGGAAACGCA ACGCCGAATT CAGGCGCTGG AAGAACAGCA AGTGCAGCAG
CGTCGCGACT ATCAGAATCA GGCCAGCCAT CTGGTCGATC TCGACAAACG TCACGAACTG
GAACTGCACA TCGTCAGCCT GGAGCGGGAA CGCCAGCAGC TCCAACCGGG CAAAGAGTGT
CCCCTGTGCG GTTCAACGCA CCACCCGGCG GTGGAGCGTT ATCAGGCGCT GCGTCCGTCC
GAAACCCAGC TTCGGCTACA TGCGTTGCGT CAGGAGGTGG ACGCACTGAA AGCCAACGTA
GTGCAGACCG AAACCCAGCT TCAGTTGCAA AAACAGCACC GCCAGCAGCA GCAAAACGCA
CTGGAAAGCG TCCAGCGCGA TTACGAGTCG CTGCGGTTGC AGTGCCAGTC TGTCAGTGAG
CGCTTACTGG TTAGCTTCGA TCCGCTGCAA CTGCCGACGT TGCACCAGTG GATTGATGAA
TGTGACGCGC AGGAGCAATC GCTACAGACA CAAATCGCCA GCCGTGAGCG CAATCAGCGC
ACTATTCAGG AAAGTAAGGA TTTACTGACT TCGGCACAGC AACTGCTGGC GCAAACCCTA
CAGCAACTGG AGCTAAACAC CCAGCAGCAA TCGGCGTTGC AGACCTCGCG GGATGAACTA
CAGCGATTAC TGGACAAAAC CGAACGCGAA TTACAACGCC TGCACGATAG CCTGAGCCAA
ACGATGGAAA CGTTCGGGCT GACGGCACCC TCGCTCGCTC AGCAGGAGGA GTGGCTGCGC
CAGCGCCAGA CCGAATGGTT ACGCTGGCAG GAAAACGAAC ACGAGCAGCA TCAGTGCCAA
CCGCAACTGG CGGCACAAGC CGCCGAGATC ACCGCCGGCC AGCGACGACT GGAAGAGACC
GATGTCGCCA TCAAAACCGG CCAGTTACAG TTGGCGGAAA CACAACGCAC GCTGGAGCAG
GCGCAGCAAC AACGTTGGCA ACTCCTGGGC AACCAGGCGG TGAACGACGT GCTGAAGCAG
TTGCGACAGG TCAGCCAGGC GCTGGAACTG GAGAATCAAC AGGCGCAGCA GCAATGGCAA
CAAGGCCAGT CGCTGTTAAG CCGCCTGAAC GGAGAAATCG ACAGTCTCGA ACAGCAAAGC
CAACACGCAG ACAGCGTGTT GCAACAACTG CAAACCCAGT TTGACGCAGC GCTCGCCGAG
GCCGGATTCA GTGATGCCAT CGTCTTTCGT GAAGCTCTGC TGGACGAAGG GGAACGCCAT
CAGCTCATTA CGCTGAAAGA GCGGCTCAGC CAACGTCAAC AACAGGTTGA AGCGTTATTG
CAACAGGCCG GCAGCGCGTT GGAGCAACAT CAGGCGACCC GGCCCGAATC GATGCCGGAA
GGCATCAACG ACTGGGATAT TCGTCAGTTG CTTGCCGGTC TGGGCGACAT GGTGAAAGTC
GAAGTCGAAC GTCAGGGCGA GCTGCGCCAG CAATTAGCCA GCGACCAACA ACGCCGCGAC
AAACAACGCC AGTTGCTCGA CGCTATCGAA CGCGGCCAGC AAGTGTGCGA TGACTGGGGC
TACCTCAACC AGCTAATCGG GTCGCAAAAA GGCGACAAAT TCCGCCGTTT CGCTCAAGGG
TTGACGCTGG ACCATCTGGT CTTTCTGGCC AACCGCCAGC TCTCTCGTCT GCACGGGCGC
TACCTGCTGC AACGCAAGGC TTCCGACACC CTGGAGCTAC AGGTGGCCGA TACCTGGCAG
GCCGATGCCG TTCGCGATAC CCGGACATTA TCCGGCGGCG AGAGTTTTCT GGTCAGCCTG
GCGCTGGCGC TGGCGTTGTC CGATTTGGTC AGCGCCAAAA CCCGTATCGA CTCGCTATTC
CTTGATGAAG GTTTCGGCAC GCTGGACAGC GAAACGCTGG ATACCGCGCT GGACGTGCTG
GATAACCTCA ATGCGTCCGG CAAGACTATC GGCGTAATCA GCCATGTCGA AGCGATGAAA
GACCGCATAC AGGTGCAGAT CCGGGTCAAA AAGCGCAACG GCCTCGGCAT CAGCCAGCTC
GATAGCACGT ACGCCGTGAA ATAA
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| Protein sequence | MKILSLRLKN LNSLQDEWKI DFTREPFASN SLFAITGPTG AGKTTLLDAI CLALYHQTPR
LKVSPGHNEL MTRHTAECLA EVEFEVKNVA YRAFWSQRRA HNSPEGNLQP PKVELALCAD
GKILTDKVND KLAMIADITG LDFDRFTKSM MLSQGQFAAF LNADANQRAE LLEELTGTDI
YGQISERVFE RHKEAQSQLE TLRAKVATLE LLSDEQRQAL EQQLDAIRQQ EHSLSIHREE
VLAHQRWYDS LLQLQQTQKQ ALQQQSVHQQ LQQQSQPQLD KLQRSEPAEK LRPLYDERGR
AQREKQRLNQ QLTSVRQQIG RQQDAMNQLK IQLEKALSTR QQHAEHRQQQ ETLINERILP
LDHHIATLQT QRAQQQQAID SLIEQQKTLI AGLARLQRQQ EQTRLRLEEI ENYRRQHSRH
QHLGSHIPLW QAQFPQQLKW QQDLHVVQEK AAQQQIQAEY LDQQRTSLVE KQQAQQLACE
RARQRLNEHL QQDEQLEAEY PLANLRQQLA RRAAERPDRQ QLATSAAVLQ QLISQRTLLE
VQQLETQRRI QALEEQQVQQ RRDYQNQASH LVDLDKRHEL ELHIVSLERE RQQLQPGKEC
PLCGSTHHPA VERYQALRPS ETQLRLHALR QEVDALKANV VQTETQLQLQ KQHRQQQQNA
LESVQRDYES LRLQCQSVSE RLLVSFDPLQ LPTLHQWIDE CDAQEQSLQT QIASRERNQR
TIQESKDLLT SAQQLLAQTL QQLELNTQQQ SALQTSRDEL QRLLDKTERE LQRLHDSLSQ
TMETFGLTAP SLAQQEEWLR QRQTEWLRWQ ENEHEQHQCQ PQLAAQAAEI TAGQRRLEET
DVAIKTGQLQ LAETQRTLEQ AQQQRWQLLG NQAVNDVLKQ LRQVSQALEL ENQQAQQQWQ
QGQSLLSRLN GEIDSLEQQS QHADSVLQQL QTQFDAALAE AGFSDAIVFR EALLDEGERH
QLITLKERLS QRQQQVEALL QQAGSALEQH QATRPESMPE GINDWDIRQL LAGLGDMVKV
EVERQGELRQ QLASDQQRRD KQRQLLDAIE RGQQVCDDWG YLNQLIGSQK GDKFRRFAQG
LTLDHLVFLA NRQLSRLHGR YLLQRKASDT LELQVADTWQ ADAVRDTRTL SGGESFLVSL
ALALALSDLV SAKTRIDSLF LDEGFGTLDS ETLDTALDVL DNLNASGKTI GVISHVEAMK
DRIQVQIRVK KRNGLGISQL DSTYAVK
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