| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3094 |
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| Symbol | secF |
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| ID | 8117792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 3526217 |
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| End bp | 3527188 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644853471 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_003005395 |
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| Protein GI | 251790674 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.278166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCACAGG AATATACTGT TGAACAATTG AACTACGGCC GTAAAGTTTA TGACTTTATG
CGCTGGGACT ACTGGGCTTT CGGTTTGTCC GGTTTGTTGT TGATCCTGTC TATCGCCGTG
ATGGGCGTGC GTGGTTTCAA CTGGGGACTG GATTTCACCG GTGGTACGGT TATCGAGATT
TCGCTGGAAA AATCCGTGGA TCTGGAGCAG ATGCGTGAAG CGCTGCAGAA AGCCGGTTTT
GCGGATCCGC TGGTACAGAA CTTCGGCAGC AGCCGCGACA TTATGGTACG TATGCCGCCT
GCTCACGATG AGTCCGGCGG TCAGGCTCTC GGCAGCAAAG TTGTTAACGT GATCAACGAA
TCAACCAGCC AGAATGCAGC GATTAAGCGC ATTGAATTCG TTGGGCCGAG CGTAGGGGCT
GATCTGGCGC AGAATGGTGC CATGGCGTTG ATGGCGGCGT TAATCAGTAT TCTGGTCTAC
GTCGGCTTTC GTTTCGAATG GCGTCTGGCT GCCGGGGTGG TGATTGCGTT GGCGCACGAC
GTGATCATCA CTATGGGCAT ACTGTCGTTG TTCGATATTG AAATCGACCT GACGATTGTG
GCGTCGCTGA TGTCGGTCAT CGGTTATTCG CTGAACGATA GCATCGTGGT GTCTGACCGT
ATTCGTGAAA ACTTCCGCAA GATCCGCCGT GGAACGCCTT ACGAAATTTT CAACGTGTCG
TTGACCCAAA CGTTGCACCG AACCTTGATC ACATCGGGAA CGACGTTGGT GGTGATCCTG
ATGTTGTACC TGTTCGGCGG TGCGATGTTG AAAGGGTTCT CGTTGACCAT GTTGATTGGT
GTGGCCATCG GTACGGTATC TTCTATTTAT GTCGCTTCCG CACTGGCGCT CAAGTTGGGT
ATGAAACGCG AGCACATGTT GGTGCAGAAA GTGGAAAAAG AGGGCGCGGA CCAGCCGTCA
TTGCTGCCGT AA
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| Protein sequence | MAQEYTVEQL NYGRKVYDFM RWDYWAFGLS GLLLILSIAV MGVRGFNWGL DFTGGTVIEI
SLEKSVDLEQ MREALQKAGF ADPLVQNFGS SRDIMVRMPP AHDESGGQAL GSKVVNVINE
STSQNAAIKR IEFVGPSVGA DLAQNGAMAL MAALISILVY VGFRFEWRLA AGVVIALAHD
VIITMGILSL FDIEIDLTIV ASLMSVIGYS LNDSIVVSDR IRENFRKIRR GTPYEIFNVS
LTQTLHRTLI TSGTTLVVIL MLYLFGGAML KGFSLTMLIG VAIGTVSSIY VASALALKLG
MKREHMLVQK VEKEGADQPS LLP
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