| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3090 |
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| Symbol | |
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| ID | 8117788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 3520544 |
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| End bp | 3521656 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644853467 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_003005391 |
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| Protein GI | 251790670 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.645676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTACAT ACTCTGATGA ATTCTATATG GCTCGCGCAC TGGAGCTTGC TCGCCGCGGG
CGTTTTACTA CGGCGCCGAA TCCGAACGTC GGCTGTGTGA TCGTCAGAGA CGGCGAGATA
GTCGGTGAGG GATACCACCA GAAAGCCGGC GAGCCCCATG CCGAGGTACA TGCGCTGCGT
ATGGCAGGCG ACAAGGCGCA CGGCGCTACG GCGTATGTGA CGCTTGAGCC CTGTAGTCAT
CACGGGCGTA CCCCGCCTTG CGCCGATGCG CTGGTTGCAG CCGGTGTGGC GCGGGTGGTC
GCCGCGATGC AAGACCCTAA CCCGCAGGTA GCCGGGCGCG GTTTGCATCG TTTACAACAA
GCCGGTATCG CCGTGCATCA CGGTGTCCTG ATGGAGCAGG CGGAAAAGAT TAACCGCGGC
TTTCTGAAGC GGATGCGCAC CGGCTTCCCT TATGTACAAC TCAAACTCGG GGCGTCGCTG
GATGGCCGGA CGGCGATGGC GTCCGGTGAA AGCCAGTGGA TCACCTCGCC GCAGTCTCGT
CAGGATGTGC AGCGTTTTCG CGCACAGAGT TCGGCTATTC TCAGCAGCAG CGCCACCGTG
CTGGCGGATG ATCCGTCGTT GACCGTGCGT TGGTCCGAGC TGGATGAAGA TACCCAGCGC
CTCTACCCTG AAAGTGCGAT GCGTCAGCCG GTACGCGTGA TTGTCGATAG TCAGTCGCGC
GTGACGCCGC AGCATTGCCT GGTGAACCAA CCGGGGCAGA CCTGGCTGGC GCGTGCACGT
CAGGATGATC AGTCATGGCC GGATGGCGTA GAGCAACTGG AAATGCCGCT GCATGGCGGT
GGTATCGATC TGGTTGGCCT GATGATGACG CTGGGTAAAC GCCAGATTAA TACGGTATGG
GTGGAGGCGG GCCCTCGTCT GGCCGGTGCA TTATTGCAAG CCGGCGTGGT GGATGAACTG
ATCGTCTATC TGGCGCCGAA ATTATTGGGG GACGCAGCGC GATCGCTGTG CGTCCTGCCG
GGGCTGGAAC AGTTGTCGCA GGCACCGATG TTCGATATGA CGGATGTCTG CCAGATAGGG
CCGGATGTTC GCCTGACGCT GAAGCCGCGT TAG
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| Protein sequence | MATYSDEFYM ARALELARRG RFTTAPNPNV GCVIVRDGEI VGEGYHQKAG EPHAEVHALR
MAGDKAHGAT AYVTLEPCSH HGRTPPCADA LVAAGVARVV AAMQDPNPQV AGRGLHRLQQ
AGIAVHHGVL MEQAEKINRG FLKRMRTGFP YVQLKLGASL DGRTAMASGE SQWITSPQSR
QDVQRFRAQS SAILSSSATV LADDPSLTVR WSELDEDTQR LYPESAMRQP VRVIVDSQSR
VTPQHCLVNQ PGQTWLARAR QDDQSWPDGV EQLEMPLHGG GIDLVGLMMT LGKRQINTVW
VEAGPRLAGA LLQAGVVDEL IVYLAPKLLG DAARSLCVLP GLEQLSQAPM FDMTDVCQIG
PDVRLTLKPR
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