Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3067 |
Symbol | clpX |
ID | 8117765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 3497133 |
End bp | 3498407 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644853444 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_003005368 |
Protein GI | 251790647 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATA AGCGCAAAGA CGGTTCAGGG AAGCTGCTGT ACTGTTCTTT CTGCGGCAAA AGCCAACACG AGGTTCGTAA GCTGATTGCC GGGCCGTCAG TGTATATCTG CGATGAATGT GTTGACTTGT GTAACGACAT TATTCGCGAA GAAATTAAAG AAGTAGCGCC ACACCGTGAG CGCAGCGCGT TACCGACGCC ACACGAAATC CGTCATCATC TGGATGATTA TGTCATTGGT CAGGAGCAGG CGAAAAAGGT ACTGGCGGTT GCTGTCTACA ACCACTACAA ACGTTTGCGC ACTAGTGACG GCAATAATGG CGTCGAACTC GGCAAAAGCA ATATTTTGCT GATCGGCCCG ACGGGTAGCG GGAAAACGCT GCTGGCGGAA ACGCTGGCCC GTTTTCTGGA TGTGCCGTTC ACTATGGCTG ATGCCACGAC ATTAACCGAA GCCGGTTATG TGGGCGAAGA CGTTGAGAAT ATCATCCAGA AGCTGTTGCA GAAGTGTGAT TACGATGTGC AAAAAGCGCA ACGCGGCATC GTCTATATCG ATGAAATCGA CAAGATTTCT CGTAAATCGG ACAATCCTTC CATTACTCGC GATGTGTCGG GGGAAGGGGT GCAGCAGGCG TTACTGAAGT TGATTGAAGG CACCATCGCC GCTGTTCCGC CGCAAGGTGG CCGTAAGCAT CCACAGCAGG AGTTTTTGCA GGTTGATACC TCCAAAATTC TGTTTATTTG TGGTGGTGCA TTCGCCGGGC TGGACAAAGT CATTGAACAG CGTACGGATA CCGGTCGTGG TATCGGTTTC AACGCGACAG TGAAAGGCGT GTCTCAGAAA GCGACGGAAG GTGAACTGCT GAGCCAGGTT GAACCGGGAG ACTTGATTAA GTTTGGTCTT ATTCCCGAAT TTATCGGCCG TTTGCCGGTA GTAGCAACGC TTAAGGAATT GGATGAAGAA GCGTTGATCC AGATCCTGCG TGAACCGAAG AATGCGCTGA CCAAACAGTA TCAGGCGCTC TTTAAGCTGG AAGGCGCAGA ACTGGAGTTC CGGGACGAAG CGCTGACGGC CATTGCCAAG AAAGCGATGG CACGTAAAAC CGGCGCACGT GGGTTGCGTT CCATCGTGGA AGCGGCATTG CTGGAGACGA TGTACGATCT GCCTTCACTG GAAAACGTAG ATAAAGTGGT GATCGACGAG TCTGTCATTT CAGGGCAGAG CGAGCCGCTG CTGATTTACG GTAAGCCTGA AGCACAACAG GCGTCTGGTG AATAA
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Protein sequence | MTDKRKDGSG KLLYCSFCGK SQHEVRKLIA GPSVYICDEC VDLCNDIIRE EIKEVAPHRE RSALPTPHEI RHHLDDYVIG QEQAKKVLAV AVYNHYKRLR TSDGNNGVEL GKSNILLIGP TGSGKTLLAE TLARFLDVPF TMADATTLTE AGYVGEDVEN IIQKLLQKCD YDVQKAQRGI VYIDEIDKIS RKSDNPSITR DVSGEGVQQA LLKLIEGTIA AVPPQGGRKH PQQEFLQVDT SKILFICGGA FAGLDKVIEQ RTDTGRGIGF NATVKGVSQK ATEGELLSQV EPGDLIKFGL IPEFIGRLPV VATLKELDEE ALIQILREPK NALTKQYQAL FKLEGAELEF RDEALTAIAK KAMARKTGAR GLRSIVEAAL LETMYDLPSL ENVDKVVIDE SVISGQSEPL LIYGKPEAQQ ASGE
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