Gene Dd1591_3025 details

Gene Information

• Locus tag: Dd1591_3025
• ID: 8117002
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 3446484
• End bp: 3446939
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 644853402
• Product: protein of unknown function DUF107
• Protein accession: YP_003005326
• Protein GI: 251790605
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1585] Membrane protein implicated in regulation of membrane protease activity

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGGCGC TGGTATGGGA AAACGCCCAC TGGTTTTGGC TATCGCTCGG CGGCCTGCTG 
TTAGCAGCAG AAATGTTGGG TGCCGGCGGC TATCTGTTGT GGAGCGGTAT CGCCGCGCTG 
TTCACCGGCA TACTCGCCTG GTTGTTGCCG TTGGACTGGG CCTGGCAATG CATCGCCTTT 
GCCGTGCTGA CGGTAGTCTC TGCATTATTG TGGTGGCAGT GGCTGCGCCG TCGCCTCGAC 
AAGCAGCCGA CACCGATACT CAATCAACGC GGGCAACAAT TGATTGGCCT GCATACGACA 
TTAACCGAGC CGCTGATAAA CGGTCTTGGC CGTGTCAACA TCGGCGACAG CAGTTGGCGC 
GTGCAGGCGG AACAGGATCT CCCTGCCGGA ACCGTAGTTG AGGTCACCGC AGTAGAAGGC 
ATCACGCTGC GGGTAAGACC GCGCGTTGAT GCTTGA 

 

Protein sequence

MMALVWENAH WFWLSLGGLL LAAEMLGAGG YLLWSGIAAL FTGILAWLLP LDWAWQCIAF 
AVLTVVSALL WWQWLRRRLD KQPTPILNQR GQQLIGLHTT LTEPLINGLG RVNIGDSSWR 
VQAEQDLPAG TVVEVTAVEG ITLRVRPRVD A