Gene Dd1591_3016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_3016 
Symbol 
ID8116993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3431059 
End bp3433728 
Gene Length2670 bp 
Protein Length889 aa 
Translation table11 
GC content50% 
IMG OID644853393 
Productphosphotransfer intermediate protein in two-component regulatory system with RcsBC 
Protein accessionYP_003005317 
Protein GI251790596 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGCGG CTATCATGCG TTTCTTCCTG CTATTTATCC TGCTACTGCT GATGATGACC 
GGCACCTATA GCTATAACTA TGTCAACAAC TGGATGACGG AGAAAAAATC CACGCTGGCG
GACATTGCGG AAGGGATGCA AAAGCGTATT GATGCCTACC GTTTCTTTAC CGATCAGATT
TACAAAAATC TAATCAGCGA TACAACATCG TCTGATACCC CGAACGTCAG CCTGATCACG
CTGATGCCGA ATGTGTTTTA TGTCGAGAAA AGCGGCCACA AAACCGATGC ATTGATTTTC
GGGCCGTATG AAAAAACCAC CCTCGGCGCC ATGCACCGGA TATCACAATA TTTGGATGTG
TTGTGGGGAG CAAAAACCGA TATCTATTCG ATGTATTATC TGAACGGGTT GGACAATAGC
CTGACGATGA TTTCCACCCA ACCGCTAAAG GATATCTCGT CACAATTTCG TGGCAGTTAT
CTTTCATCAA TGGTGGAATC GCGCAAAACC GAGATGCTAC AGCAAGCAAA TACACTGGAT
GAACGGGAAA GCTTTTCACC TTTGCGCAAG CTACGTTTTT ACAACGACTA TTACTTTACC
CTACGCACGA CGTTCAATCA GCCGGGCCAT CTGGCCACCG TTATTGCTTT CGATTTATCA
ATCAACGACT TAATCCCGCG GACCTTGTCG AGAGACAGCT TCATACTGCG CCAGCAGACG
CCACCGGTCA ACGCCGATGC CAGCGCAGAT ACCGACATCC CCACCGACAT TCACCGTGAG
GGGGCCTTGC TGGAAATCTC GGCTCAGTTG ATGAATTCGC CGATCAAACT GGTTTATGCC
ATCCCACTGG GTAGGCTGGT GACGGATATG CTGCGCAATA ATCTCTGGAT CATGGCGCTA
AATCTGGCAT TGCTGTTGAT CTCGGCGGCA GGTTTCTACG CGTTACGCCG CTACTATGCC
CGTCCAAAAG ATGATTTGTC ACATCATCTG AAAGAGCAGC AACAGATGTA CGACGAGATA
GTCAGCCGTA TCCCGATAGG GGTACTGGTT TACGATTTCA GCAACAATAA AGTGATGGTG
GCGAACACGC TGGCGGAGCG GCTCTACCCT CACCTCAGCC TGAAAAAAAT CTCTACGCTG
GCGGAGGAAC ACCAGGGGGT CATTCAGGCT ACGGTGGACA ACGAGATGTA CGAAGTCCGC
GTTTTTCACA GCCAGCATAC ACCGTCATTG TGCTTATTCC TGCTGCGTGA ACAGGATCAG
GAAATACTGA TTACCAAAAA ACTGCAGCTG GCGCAGCGCG AGTTCGACAA GAACGTCTCG
GTTCGCAAGC GTTTGTTTCG CAACCTGAGT CAGGAGTTTA AACAACCGCT TTCAGCGGTA
CATCAGTTAG CGTTGGCGCT ACGCAAAACC GACCATCCGG CTGAGCAACA AAAAATGATT
CAGACGCTGA TTGCCGAAAC CAGCAGCGCT ATCCGCCTGA TGGAAAACAT TGCGCTGCAA
GCACGGCTGG AAACCGTAGA ATGGAATCTG GTCCACGGCT CGTTTTCACC ACTGACATTG
TTCGACGACC TAATGCTGGA ACTGCTGCCG CGTATCCAGC AGAAAGGACT TAAGCTGTTT
AACCATTACA AACTCAACCC GCGACAGACT TATCTGGGCG ACAGTGAATT GCTGAAGAAA
ACCCTGTCGC TGCTGCTGGA TTACTCCATC ACCAACACCG ATTACGGCAA AATCACGTTA
TCCTGCGAGC AATCGGCACA CTCTGCCGAG CAGTTGCTAA TCCGCATTAG CGATACCGGA
ACGGATATTT CCGGTATGGA AAGAGATAAT CTGGTACATC CGTTTGCCAC CCCTCCGCTA
TCCGATCGTT TCCGGCACAA TTCCGGATTA ACCCTATTTT TATGTAATCA GCTTTGCAAC
AAACTGGGCG GTCAACTGCA AATCAATAGT CGCCCAGGAC TGGGAACCCA GTACGTACTG
ACGTTGAAAC TGCAGCCGGA ACCACTGCCT GCGGAAGAAG ATGAGAAATT ATTGGACGAT
ATCACGCTAC TTCTGAATAT TACCTCGGAC GAGGTTCGTA CCATTGTCAG CCGAATGGTA
AGCAGTTGGG GGGCGGAAGT CGTGGTGTAC GATGAGCGGT TGGCGAACCA GAATGCGGAC
ATCATTATTA CTGATGATGC CAACAAGGTC GCCAGCGATA CGTTGCTGGT CACCAGTGAC
GATACCCAGT TGATCCCGCT GGGGCAACGA CGCTTGCGTA CCAATTACAA CATCAGCCAA
CTGCTGCAGG ATGGTTTGCT GAAATTGATT GAACAACAGT TGGCGACCGA CCAGGACGAT
AGCGCATCGG AAGAACAGGA CGACATCGGC TTCTATGCTC GTCAGTTACA CAGCAGTGAC
TACTATTCCT TGTTTGTCGA TACAGTACCG GAGGATATCA AGAGACTATA TACTGAGGCC
CAAGACGGCG ATTTTTTGTC ACTCGCGCAA ACCGCACACC GCCTGAAGGG TGTCTTTGCC
ATGCTGAATC TCCATCCCGG CAAGCAGTTA TGTGAAACGC TGGAAAAGCT TATTACCACC
CAGGATCGTG CGCAAATAGA AATCTACCTT CAGCAGATCG AAGGTTTTGT CACAGCATTG
CTGCAGCCAG GTGGCCAACA ATACGAGTAA
 
Protein sequence
MPAAIMRFFL LFILLLLMMT GTYSYNYVNN WMTEKKSTLA DIAEGMQKRI DAYRFFTDQI 
YKNLISDTTS SDTPNVSLIT LMPNVFYVEK SGHKTDALIF GPYEKTTLGA MHRISQYLDV
LWGAKTDIYS MYYLNGLDNS LTMISTQPLK DISSQFRGSY LSSMVESRKT EMLQQANTLD
ERESFSPLRK LRFYNDYYFT LRTTFNQPGH LATVIAFDLS INDLIPRTLS RDSFILRQQT
PPVNADASAD TDIPTDIHRE GALLEISAQL MNSPIKLVYA IPLGRLVTDM LRNNLWIMAL
NLALLLISAA GFYALRRYYA RPKDDLSHHL KEQQQMYDEI VSRIPIGVLV YDFSNNKVMV
ANTLAERLYP HLSLKKISTL AEEHQGVIQA TVDNEMYEVR VFHSQHTPSL CLFLLREQDQ
EILITKKLQL AQREFDKNVS VRKRLFRNLS QEFKQPLSAV HQLALALRKT DHPAEQQKMI
QTLIAETSSA IRLMENIALQ ARLETVEWNL VHGSFSPLTL FDDLMLELLP RIQQKGLKLF
NHYKLNPRQT YLGDSELLKK TLSLLLDYSI TNTDYGKITL SCEQSAHSAE QLLIRISDTG
TDISGMERDN LVHPFATPPL SDRFRHNSGL TLFLCNQLCN KLGGQLQINS RPGLGTQYVL
TLKLQPEPLP AEEDEKLLDD ITLLLNITSD EVRTIVSRMV SSWGAEVVVY DERLANQNAD
IIITDDANKV ASDTLLVTSD DTQLIPLGQR RLRTNYNISQ LLQDGLLKLI EQQLATDQDD
SASEEQDDIG FYARQLHSSD YYSLFVDTVP EDIKRLYTEA QDGDFLSLAQ TAHRLKGVFA
MLNLHPGKQL CETLEKLITT QDRAQIEIYL QQIEGFVTAL LQPGGQQYE