Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3016 |
Symbol | |
ID | 8116993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 3431059 |
End bp | 3433728 |
Gene Length | 2670 bp |
Protein Length | 889 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644853393 |
Product | phosphotransfer intermediate protein in two-component regulatory system with RcsBC |
Protein accession | YP_003005317 |
Protein GI | 251790596 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCGG CTATCATGCG TTTCTTCCTG CTATTTATCC TGCTACTGCT GATGATGACC GGCACCTATA GCTATAACTA TGTCAACAAC TGGATGACGG AGAAAAAATC CACGCTGGCG GACATTGCGG AAGGGATGCA AAAGCGTATT GATGCCTACC GTTTCTTTAC CGATCAGATT TACAAAAATC TAATCAGCGA TACAACATCG TCTGATACCC CGAACGTCAG CCTGATCACG CTGATGCCGA ATGTGTTTTA TGTCGAGAAA AGCGGCCACA AAACCGATGC ATTGATTTTC GGGCCGTATG AAAAAACCAC CCTCGGCGCC ATGCACCGGA TATCACAATA TTTGGATGTG TTGTGGGGAG CAAAAACCGA TATCTATTCG ATGTATTATC TGAACGGGTT GGACAATAGC CTGACGATGA TTTCCACCCA ACCGCTAAAG GATATCTCGT CACAATTTCG TGGCAGTTAT CTTTCATCAA TGGTGGAATC GCGCAAAACC GAGATGCTAC AGCAAGCAAA TACACTGGAT GAACGGGAAA GCTTTTCACC TTTGCGCAAG CTACGTTTTT ACAACGACTA TTACTTTACC CTACGCACGA CGTTCAATCA GCCGGGCCAT CTGGCCACCG TTATTGCTTT CGATTTATCA ATCAACGACT TAATCCCGCG GACCTTGTCG AGAGACAGCT TCATACTGCG CCAGCAGACG CCACCGGTCA ACGCCGATGC CAGCGCAGAT ACCGACATCC CCACCGACAT TCACCGTGAG GGGGCCTTGC TGGAAATCTC GGCTCAGTTG ATGAATTCGC CGATCAAACT GGTTTATGCC ATCCCACTGG GTAGGCTGGT GACGGATATG CTGCGCAATA ATCTCTGGAT CATGGCGCTA AATCTGGCAT TGCTGTTGAT CTCGGCGGCA GGTTTCTACG CGTTACGCCG CTACTATGCC CGTCCAAAAG ATGATTTGTC ACATCATCTG AAAGAGCAGC AACAGATGTA CGACGAGATA GTCAGCCGTA TCCCGATAGG GGTACTGGTT TACGATTTCA GCAACAATAA AGTGATGGTG GCGAACACGC TGGCGGAGCG GCTCTACCCT CACCTCAGCC TGAAAAAAAT CTCTACGCTG GCGGAGGAAC ACCAGGGGGT CATTCAGGCT ACGGTGGACA ACGAGATGTA CGAAGTCCGC GTTTTTCACA GCCAGCATAC ACCGTCATTG TGCTTATTCC TGCTGCGTGA ACAGGATCAG GAAATACTGA TTACCAAAAA ACTGCAGCTG GCGCAGCGCG AGTTCGACAA GAACGTCTCG GTTCGCAAGC GTTTGTTTCG CAACCTGAGT CAGGAGTTTA AACAACCGCT TTCAGCGGTA CATCAGTTAG CGTTGGCGCT ACGCAAAACC GACCATCCGG CTGAGCAACA AAAAATGATT CAGACGCTGA TTGCCGAAAC CAGCAGCGCT ATCCGCCTGA TGGAAAACAT TGCGCTGCAA GCACGGCTGG AAACCGTAGA ATGGAATCTG GTCCACGGCT CGTTTTCACC ACTGACATTG TTCGACGACC TAATGCTGGA ACTGCTGCCG CGTATCCAGC AGAAAGGACT TAAGCTGTTT AACCATTACA AACTCAACCC GCGACAGACT TATCTGGGCG ACAGTGAATT GCTGAAGAAA ACCCTGTCGC TGCTGCTGGA TTACTCCATC ACCAACACCG ATTACGGCAA AATCACGTTA TCCTGCGAGC AATCGGCACA CTCTGCCGAG CAGTTGCTAA TCCGCATTAG CGATACCGGA ACGGATATTT CCGGTATGGA AAGAGATAAT CTGGTACATC CGTTTGCCAC CCCTCCGCTA TCCGATCGTT TCCGGCACAA TTCCGGATTA ACCCTATTTT TATGTAATCA GCTTTGCAAC AAACTGGGCG GTCAACTGCA AATCAATAGT CGCCCAGGAC TGGGAACCCA GTACGTACTG ACGTTGAAAC TGCAGCCGGA ACCACTGCCT GCGGAAGAAG ATGAGAAATT ATTGGACGAT ATCACGCTAC TTCTGAATAT TACCTCGGAC GAGGTTCGTA CCATTGTCAG CCGAATGGTA AGCAGTTGGG GGGCGGAAGT CGTGGTGTAC GATGAGCGGT TGGCGAACCA GAATGCGGAC ATCATTATTA CTGATGATGC CAACAAGGTC GCCAGCGATA CGTTGCTGGT CACCAGTGAC GATACCCAGT TGATCCCGCT GGGGCAACGA CGCTTGCGTA CCAATTACAA CATCAGCCAA CTGCTGCAGG ATGGTTTGCT GAAATTGATT GAACAACAGT TGGCGACCGA CCAGGACGAT AGCGCATCGG AAGAACAGGA CGACATCGGC TTCTATGCTC GTCAGTTACA CAGCAGTGAC TACTATTCCT TGTTTGTCGA TACAGTACCG GAGGATATCA AGAGACTATA TACTGAGGCC CAAGACGGCG ATTTTTTGTC ACTCGCGCAA ACCGCACACC GCCTGAAGGG TGTCTTTGCC ATGCTGAATC TCCATCCCGG CAAGCAGTTA TGTGAAACGC TGGAAAAGCT TATTACCACC CAGGATCGTG CGCAAATAGA AATCTACCTT CAGCAGATCG AAGGTTTTGT CACAGCATTG CTGCAGCCAG GTGGCCAACA ATACGAGTAA
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Protein sequence | MPAAIMRFFL LFILLLLMMT GTYSYNYVNN WMTEKKSTLA DIAEGMQKRI DAYRFFTDQI YKNLISDTTS SDTPNVSLIT LMPNVFYVEK SGHKTDALIF GPYEKTTLGA MHRISQYLDV LWGAKTDIYS MYYLNGLDNS LTMISTQPLK DISSQFRGSY LSSMVESRKT EMLQQANTLD ERESFSPLRK LRFYNDYYFT LRTTFNQPGH LATVIAFDLS INDLIPRTLS RDSFILRQQT PPVNADASAD TDIPTDIHRE GALLEISAQL MNSPIKLVYA IPLGRLVTDM LRNNLWIMAL NLALLLISAA GFYALRRYYA RPKDDLSHHL KEQQQMYDEI VSRIPIGVLV YDFSNNKVMV ANTLAERLYP HLSLKKISTL AEEHQGVIQA TVDNEMYEVR VFHSQHTPSL CLFLLREQDQ EILITKKLQL AQREFDKNVS VRKRLFRNLS QEFKQPLSAV HQLALALRKT DHPAEQQKMI QTLIAETSSA IRLMENIALQ ARLETVEWNL VHGSFSPLTL FDDLMLELLP RIQQKGLKLF NHYKLNPRQT YLGDSELLKK TLSLLLDYSI TNTDYGKITL SCEQSAHSAE QLLIRISDTG TDISGMERDN LVHPFATPPL SDRFRHNSGL TLFLCNQLCN KLGGQLQINS RPGLGTQYVL TLKLQPEPLP AEEDEKLLDD ITLLLNITSD EVRTIVSRMV SSWGAEVVVY DERLANQNAD IIITDDANKV ASDTLLVTSD DTQLIPLGQR RLRTNYNISQ LLQDGLLKLI EQQLATDQDD SASEEQDDIG FYARQLHSSD YYSLFVDTVP EDIKRLYTEA QDGDFLSLAQ TAHRLKGVFA MLNLHPGKQL CETLEKLITT QDRAQIEIYL QQIEGFVTAL LQPGGQQYE
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