Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3005 |
Symbol | |
ID | 8116982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 3418422 |
End bp | 3418970 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644853382 |
Product | Lysophospholipase |
Protein accession | YP_003005306 |
Protein GI | 251790585 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.890244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGTGCTGG GCGACAGCCT AAGCGCAGGC TATCGCATGG CGGCAAATCA GGCCTGGCCG GCGTTGTTGG ATGCCGCCTG GCAGTCTCGC TCGCCCGCCG TTCCGGTTCG GGTGGTGAAC GCCAGCATCA GCGGCGACAC CGCAACGCAA GGTCTGTCTC GCCTGCCCGC TTTACTCAAA CAACACCAAC CGCGCTGGGT GTTGGTCGAG CTCGGCGGCA ATGACGGCTT GCGTGGCTTC CCGCCACAAA ACGTAGAACG GGATCTCGCC GGCGTCATTA GCCAGATAAA AACAGCCGGA GCCCAGCCGT TACTGATGCA AATTCGCTTA CCAGCTAACT ACGGGCGGCG CTATACCGAG TCGTTCAGCG CAGTTTATCC ACGCCTCGCC GGTACGTTTA GTATTCCGCT GTTGCCGTTT TTCATGGAAC AGGTTTATCT CAAACCGGAA TGGATGCAGG ATGACGGTAT CCATCCCACC CGTGACGCCC AGCCGTTTAT CGCCGAATGG ATGGCAAAAC AGCTCGACCC CATTATTAAC CAGCACTGA
|
Protein sequence | MVLGDSLSAG YRMAANQAWP ALLDAAWQSR SPAVPVRVVN ASISGDTATQ GLSRLPALLK QHQPRWVLVE LGGNDGLRGF PPQNVERDLA GVISQIKTAG AQPLLMQIRL PANYGRRYTE SFSAVYPRLA GTFSIPLLPF FMEQVYLKPE WMQDDGIHPT RDAQPFIAEW MAKQLDPIIN QH
|
| |