| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2976 |
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| Symbol | |
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| ID | 8116953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 3386887 |
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| End bp | 3388014 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644853353 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_003005277 |
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| Protein GI | 251790556 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0234315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTGCC CGGTAATTGA ACTGGCTCAG CAACTTATTA AATGCCCGTC TCTCAGCCCG
GATGACGCCG GCTGTCAGGC GCTGATGATC GAACGTCTGC AAGCCATCGG TTTTGTCATC
GAAACGATGG ATTTCGGCGA TACCCAGAAT TTCTGGGCCT GGCGCGGTCA AGGCAAAACA
CTGGCGTTTG CCGGGCATAC CGATGTCGTC CCTGCAGGTA ACCCAAGCCA GTGGCAAACG
CCGCCGTTCG AACCGACTAT CCGTGACGGC GTGTTGTACG GCCGTGGCGC TGCCGATATG
AAAGGCTCGC TGGCGGCAAT GGTCGTGGCG GCAGAACGTT TCGTCGCGGC GCATCCCAAT
CACCAGGGGC GCCTGGCATT TCTCATCACC TCTGACGAAG AAGCCAGTGC CGTCAACGGT
ACCGTCAAGG TTGTAGAAGC ACTGATGGCG CGTCAGGAAA GGCTGGACTA TTGCCTGGTC
GGCGAGCCTT CCAGTACCGA ACGGGTCGGC GATGTGGTGA AAAACGGCCG ACGCGGCTCT
ATTACCGCTA ATTTGCGGAT TCATGGCGTG CAGGGCCATG TGGCTTATCC ACATCTGGCG
GATAACCCTG TACACCGGGT AATCCCCGCC TTGCATCAAC TGGTGGATAC CGTCTGGGAT
CAGGGCAACG AGTTCTTTCC CCCAACCAGT ATGCAAATAG CCAATATCAA TGCCGGCACC
GGCAGTAATA ACGTGATCCC CGGCGAACTT AGCGTTCAGT TCAATTTCCG TTTTAGTACT
GAACTGACTG ATGAGCTGAT TAAACAACAA GTCAAGGCGT TGCTTGATAG TCACCAGTTA
AATTACACGC TGGAGTGGCA GTTATCCGGT CACCCGTTCC TGACCGGTCG CGGCGAGCTG
GTGGATGCCG TCGTCAACGC CGTTGAACAC TACAGTGAAA TCACGCCGCA GCTCCTGACG
ACCGGCGGCA CCTCGGACGG ACGCTTCATT GCCCGCATGG GCGCACAGGT CGTCGAATTG
GGGCCTGTCA ACGCCACTAT TCATAAAGTA GATGAGTGTG TGAGTGCAGC CGACCTGCAA
CTGCTTAGCC GTATGTACCA ACGTATTATG GAGCAATTGA TCGCATGA
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| Protein sequence | MSCPVIELAQ QLIKCPSLSP DDAGCQALMI ERLQAIGFVI ETMDFGDTQN FWAWRGQGKT
LAFAGHTDVV PAGNPSQWQT PPFEPTIRDG VLYGRGAADM KGSLAAMVVA AERFVAAHPN
HQGRLAFLIT SDEEASAVNG TVKVVEALMA RQERLDYCLV GEPSSTERVG DVVKNGRRGS
ITANLRIHGV QGHVAYPHLA DNPVHRVIPA LHQLVDTVWD QGNEFFPPTS MQIANINAGT
GSNNVIPGEL SVQFNFRFST ELTDELIKQQ VKALLDSHQL NYTLEWQLSG HPFLTGRGEL
VDAVVNAVEH YSEITPQLLT TGGTSDGRFI ARMGAQVVEL GPVNATIHKV DECVSAADLQ
LLSRMYQRIM EQLIA
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