Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_2974 |
Symbol | cspE |
ID | 8116951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 3385317 |
End bp | 3385526 |
Gene Length | 210 bp |
Protein Length | 69 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644853351 |
Product | cold shock protein CspE |
Protein accession | YP_003005275 |
Protein GI | 251790554 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0637761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAAGA TTAAAGGTAG CGTTAAGTGG TTTAATGAGT CCAAAGGATT CGGTTTCATT ACTCCGGAAG ATGGCAGCAA GGACGTATTC GTTCACTTCT CTGCTATCCA GAGCAACGGT TTCAAAACCC TGGCTGAAGG TCAGCGCGTA GAGTTTGAAA TCACCAGCGG CGCTAAAGGA CCTTCTGCTG CTAACGTTAT CGCTATTTAA
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Protein sequence | MSKIKGSVKW FNESKGFGFI TPEDGSKDVF VHFSAIQSNG FKTLAEGQRV EFEITSGAKG PSAANVIAI
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