| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2970 |
|---|
| Symbol | |
|---|
| ID | 8116947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 3382436 |
|---|
| End bp | 3383401 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644853347 |
|---|
| Product | lipoyl synthase |
|---|
| Protein accession | YP_003005271 |
|---|
| Protein GI | 251790550 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0320] Lipoate synthase |
|---|
| TIGRFAM ID | [TIGR00510] lipoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0207097 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAC CGATTCAGAT CGAACGTGGC GTCAAATACC GCGATGCAGA CAAAATGGCC
CTGATCCCGG TGCGCACCGT TGCTACCGAG CGTCAGGAAA TGCTCCGCAA ACCAGAATGG
ATGAAGATAA AATTACCTGC GGACTCCAGC CGGATTCAGG GCATCAAGGA CGCCATGCGC
CGTAATGGTC TGCACTCGGT TTGCGAAGAA GCATCCTGCC CTAATCTGGC GGAGTGTTTT
AACCACGGTA CCGCTACGTT CATGATCCTT GGCGCCATCT GTACTCGTCG TTGTCCGTTC
TGCGATGTCG CCCATGGCCG CCCGCTGACG CCAGATGCCA ATGAACCGGA AAAACTGGCT
CAGACTATCC ATGATATGGG GCTGCGCTAT GTCGTGATTA CCTCTGTTGA CCGCGACGAC
TTGCGGGATG GCGGCGCGCA GCATTTTGCC GACTGTATCA GTGCCATACG CCGCAAAAGC
CCAAACATCC GAATTGAAAC GCTGGTGCCG GATTTTCGTG GCCGTATGGA TCGGGCGTTG
GATATTCTGA CCGTCACGCC GCCGGACGTG TTCAACCATA ATCTGGAAAA CGTGCCGCGT
CTCTATCGCC AAGTCCGTCC TGGCGCCGAT TATGAATGGT CATTAAAGTT ATTGGAGAAA
TTCAAATCAG TTCACCCGAA CATACCGACT AAATCCGGTT TGATGGTGGG ACTGGGCGAA
ACCAATGACG AAATACTGGA CGTTATGCGC GATCTGCGTC GCCACGGCGT CACCATGTTG
ACCCTAGGGC AATATTTGCA GCCAAGCCGT CACCACTTGC CGGTTCAGCG TTATGTCCCG
CCGGAAGAGT TCGAAGAAAT GAAGGCAGAA GCATTGGCAA TGGGCTTTAC CCATGCGGCC
TGCGGTCCGT TCGTTCGCTC TTCCTATCAT GCAGACCTAC AAGCCAAAGG GATTGAAGTG
AAATAG
|
|---|
| Protein sequence | MSKPIQIERG VKYRDADKMA LIPVRTVATE RQEMLRKPEW MKIKLPADSS RIQGIKDAMR
RNGLHSVCEE ASCPNLAECF NHGTATFMIL GAICTRRCPF CDVAHGRPLT PDANEPEKLA
QTIHDMGLRY VVITSVDRDD LRDGGAQHFA DCISAIRRKS PNIRIETLVP DFRGRMDRAL
DILTVTPPDV FNHNLENVPR LYRQVRPGAD YEWSLKLLEK FKSVHPNIPT KSGLMVGLGE
TNDEILDVMR DLRRHGVTML TLGQYLQPSR HHLPVQRYVP PEEFEEMKAE ALAMGFTHAA
CGPFVRSSYH ADLQAKGIEV K
|
|---|
| |