| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2960 |
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| Symbol | holA |
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| ID | 8118377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 3372747 |
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| End bp | 3373778 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644853337 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_003005261 |
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| Protein GI | 251790540 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCGGC TCTATCCTGA ACAACTGACC GCGCAGCTCC ACGAGGGGCT GCGCGGCTGT
TATCTGTTGT TTGGCAATGA ACCGTTATTG CTGCAGGAAA GTCAGGATCA CATCCGCACT
ATCGCCCGTC AGCAGGATTT TCTGGAGCAT TTTAGTTTCA CGCTGGATAA CAACACCGAC
TGGGAAGCGA TTTTTTCTAC TTGCCAGGCA CTCAGTCTGT TCGCCTCTCG CCAGACGTTG
TTGCTGATTC TGCCGGACGC CGGCCCCGGC GCTCCCGCCG CTGAGCAGTT GGTTAAACTC
GCCACGTTAC TGCACTCTGA CATTTTATTG ATAGTCAGAG GTAACAAACT GACCAAAGCG
CAGGAAAACA GCGCTTGGTT CAAGGCGCTG TCGCAACATG GCGTGTACGT TCCCTGTATG
ACGCCAGAAC AGGAACAACT TCCTCGTTGG GTGGCACAGC GCGCTAAAAG CATGAAGCTG
GAACTGGATG AAGCGTCCAG CCAGTTAGTT TGCTATTGCT ATGAAGGCAA TATGCTGGCA
TTAGTGCAGG CGCTGGAGCG ACTATCCTTA CTATATCCGG ACGGCAAACT GACGCTGCCG
CGAGTCGAAC AGGCCGTCAA CGATGCCGCT CACTTTACGC CGTACCATTG GCTGGATGCG
TTGCTCGGCG GCAAAAGTAA GCGAGCCTGG CACATCCTGC AGCAATTACG TCTGGAAGAC
TGTGAACCCG TCATTCTGCT GCGCACCGTA CAGCGTGAAT TGCTGTTGTT GCTACAGTTA
AAACGGCGCA TGGCAACCAC GCCGCTGCGT ACGCTGCTGG ATCAGCATAA GATTTGGCAA
AATCGTCGGC CATTACTGAC GCAAGCATTA CAGCGCCTGT CTGCGGTGCA ATTACAACAG
GCGATTACTC TGCTGAGCCG ACTGGAAATC ACCCTGAAAC AGAATTATGG GCAGCCTGTC
TGGGCCGAAC TGGAAACGTT GTCGATGATT CTGTGCGGCA AAGCATTGCC CGATGGCCTG
CTCGAGGTAT AG
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| Protein sequence | MIRLYPEQLT AQLHEGLRGC YLLFGNEPLL LQESQDHIRT IARQQDFLEH FSFTLDNNTD
WEAIFSTCQA LSLFASRQTL LLILPDAGPG APAAEQLVKL ATLLHSDILL IVRGNKLTKA
QENSAWFKAL SQHGVYVPCM TPEQEQLPRW VAQRAKSMKL ELDEASSQLV CYCYEGNMLA
LVQALERLSL LYPDGKLTLP RVEQAVNDAA HFTPYHWLDA LLGGKSKRAW HILQQLRLED
CEPVILLRTV QRELLLLLQL KRRMATTPLR TLLDQHKIWQ NRRPLLTQAL QRLSAVQLQQ
AITLLSRLEI TLKQNYGQPV WAELETLSMI LCGKALPDGL LEV
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