| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2954 |
|---|
| Symbol | |
|---|
| ID | 8118371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 3366646 |
|---|
| End bp | 3367386 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644853331 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_003005255 |
|---|
| Protein GI | 251790534 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATAG ATTGGAACTG GGGTATATTC CTGCAACCGG CCCCGTTCGG AAATACGACC
TATCTGGGGT GGATTATTTC CGGCCTGCAG GTCACCGTGT CACTTTCCTT GTGTGCCTGG
ATCATCGCTT TCCTGCTGGG CTCACTGCTG GGTATTCTAC GTACCGTTCC CCATCGCCTG
TTGTCTGGTA TCGGCACCTG CTATGTGGAA ATGTTCCGTA ATGTACCGTT AATTGTTCAG
TTCTTTAGCT GGTATTTGGT GATACCGGAA CTTCTGCCGG CCAAACTAGG TATGTGGTTT
AAAGCGGAAC TGGATCCGAA TATTCAATTT TTCCTGTCGT CCATGTTTTG TCTGGGTATG
TTCACCGCCG CACGCGTCTG CGAACAGGTT CGGGCTGGTA TTCAGTCGCT GCCGCGCGGC
CAGAAAGCGG CGGGTCTGGC GATTGGTCTG ACGCTTCCTC AAACTTACCG TTATGTTCTG
CTGCCCAACG CCTATCGGGT CATTGTGCCG CCGTTGACCT CTGAAATGCT CAATCTGGTG
AAAAACTCCG CGATCGCCTC CACCATCGGC CTGATGGACA TGGCGGCGCA AGCCGGCAAA
CTGCTGGATT ACTCTGCCCA TGCCTACGAG TCTTTCAGCG CGATAACGCT GGCTTATGTG
GGTATCAACG CCATCATCAT GCTGTTGATG CAGATTGTAG AGCGAAAAAC TCGCCTGCCG
GGCAACCTGG GGAGCAAATA A
|
|---|
| Protein sequence | MSIDWNWGIF LQPAPFGNTT YLGWIISGLQ VTVSLSLCAW IIAFLLGSLL GILRTVPHRL
LSGIGTCYVE MFRNVPLIVQ FFSWYLVIPE LLPAKLGMWF KAELDPNIQF FLSSMFCLGM
FTAARVCEQV RAGIQSLPRG QKAAGLAIGL TLPQTYRYVL LPNAYRVIVP PLTSEMLNLV
KNSAIASTIG LMDMAAQAGK LLDYSAHAYE SFSAITLAYV GINAIIMLLM QIVERKTRLP
GNLGSK
|
|---|
| |