Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_2948 |
Symbol | |
ID | 8118365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 3359514 |
End bp | 3360944 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644853325 |
Product | tRNA-i(6)A37 thiotransferase enzyme MiaB |
Protein accession | YP_003005249 |
Protein GI | 251790528 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0869387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATGA CAAAGAAACT GCATATCAAA ACCTGGGGCT GTCAGATGAA TGAATATGAT TCATCGAAGA TAGCCGATCT CCTGGAAAGT ACGCACGGTT ACCAGCTGAC CGACGTCGCT GAAGAAGCCG ACCTTCTGCT GCTGAATACC TGTTCGATCC GTGAAAAGGC GCAGGAAAAA GTGTTTCATC AGCTCGGCCG CTGGAAAACG CTCAAAGACG TCAATCCGAA TCTGATTATC GGTGTGGGCG GTTGTGTGGC GTCGCAGGAA GGCGAACATA TTCGTGATCG CGCCCATTAT GTCGACGTGA TCTTCGGGCC GCAAACGCTG CATCGTTTAC CGGAAATGAT TAATCATGTA CAGGGCACCC GTAGCCCTAT CGTGGACATC AGCTTCCCGG AAGTAGAGAA ATTCGATCGC TTGCCGGAAC CGCGCGCCGA AGGTCCGACG GCCTTTGTTT CCATCATGGA AGGCTGCAAC AAATACTGTA CATTCTGCGT CGTGCCTTAT ACCCGCGGTG AAGAAGTCAG CCGCCCGGCG GACGACGTCT TGTTTGAAAT CGCCCAACTG GCGGCGCAAG GCGTACGCGA AGTCAACCTG CTGGGCCAGA ACGTGAACGC TTACCGCGGC GCCACGCATG ATGGCGATAT TTGCAGCTTT GCCGAATTAC TGCGTCTGGT GGCGGCGATC GACGGTATTG ACCGTATTCG TTTTATTACC AGCCATCCGA TTGAATTCAC CGACGACATC ATCAGCGTAT ACGAAGATAC GCCGGAGCTG GTGAGCTTCC TGCATCTGCC GGTTCAAAGC GGTTCAGACC GCATTCTGAC GATGATGAAA CGCCGCCATA CCGCACTGGA ATACAAAGCG ATCATCCGCA AACTGCGCAA GGCACGCCCG TCTATCCAGA TCAGCTCCGA TTTTATCATC GGCTTCCCGG GCGAAACCCA GGAAGATTTC GAACAAACCA TGCAATTAAT CGCCGATGTC GATTTCGACA TCAGCTTTAG CTTTATCTAC TCCCCTCGCC CCGGTACTCC GGCCGCCGAC ATGGTGGACG ATGTGACCGA AGAGGAGAAA AAACAACGCC TGTACATTCT GCAAGAGCGC ATTAATCAGC AGGCCATGCA GTACAGCCGC CGGATGATGG GCACCGTGCA GCGTATTCTG GTTGAAGGCA CCTCGCGCAA GAACGTGATG GAGCTGTCCG GCCGCACCGA AAATAACCGC GTGGTGAACT TCGAAGGCAC TCCCGACATG ATCGGCAAGT TTGTCGACGT AGAAATCGTC GATGTTTACC CGAATTCATT GCGTGGCGTG GTGGTGCTGA CTGAAGACCA GATGGATTTA CGCGTCAGCG AATCACCGAC ATCGGTCATC GCCCGGACCC GTAAAGAAGA CGAACTCGGC GTCGGTATCT ATCAGCCGTA A
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Protein sequence | MTMTKKLHIK TWGCQMNEYD SSKIADLLES THGYQLTDVA EEADLLLLNT CSIREKAQEK VFHQLGRWKT LKDVNPNLII GVGGCVASQE GEHIRDRAHY VDVIFGPQTL HRLPEMINHV QGTRSPIVDI SFPEVEKFDR LPEPRAEGPT AFVSIMEGCN KYCTFCVVPY TRGEEVSRPA DDVLFEIAQL AAQGVREVNL LGQNVNAYRG ATHDGDICSF AELLRLVAAI DGIDRIRFIT SHPIEFTDDI ISVYEDTPEL VSFLHLPVQS GSDRILTMMK RRHTALEYKA IIRKLRKARP SIQISSDFII GFPGETQEDF EQTMQLIADV DFDISFSFIY SPRPGTPAAD MVDDVTEEEK KQRLYILQER INQQAMQYSR RMMGTVQRIL VEGTSRKNVM ELSGRTENNR VVNFEGTPDM IGKFVDVEIV DVYPNSLRGV VVLTEDQMDL RVSESPTSVI ARTRKEDELG VGIYQP
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