Gene Dd1591_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2948 
Symbol 
ID8118365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3359514 
End bp3360944 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content54% 
IMG OID644853325 
ProducttRNA-i(6)A37 thiotransferase enzyme MiaB 
Protein accessionYP_003005249 
Protein GI251790528 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0869387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATGA CAAAGAAACT GCATATCAAA ACCTGGGGCT GTCAGATGAA TGAATATGAT 
TCATCGAAGA TAGCCGATCT CCTGGAAAGT ACGCACGGTT ACCAGCTGAC CGACGTCGCT
GAAGAAGCCG ACCTTCTGCT GCTGAATACC TGTTCGATCC GTGAAAAGGC GCAGGAAAAA
GTGTTTCATC AGCTCGGCCG CTGGAAAACG CTCAAAGACG TCAATCCGAA TCTGATTATC
GGTGTGGGCG GTTGTGTGGC GTCGCAGGAA GGCGAACATA TTCGTGATCG CGCCCATTAT
GTCGACGTGA TCTTCGGGCC GCAAACGCTG CATCGTTTAC CGGAAATGAT TAATCATGTA
CAGGGCACCC GTAGCCCTAT CGTGGACATC AGCTTCCCGG AAGTAGAGAA ATTCGATCGC
TTGCCGGAAC CGCGCGCCGA AGGTCCGACG GCCTTTGTTT CCATCATGGA AGGCTGCAAC
AAATACTGTA CATTCTGCGT CGTGCCTTAT ACCCGCGGTG AAGAAGTCAG CCGCCCGGCG
GACGACGTCT TGTTTGAAAT CGCCCAACTG GCGGCGCAAG GCGTACGCGA AGTCAACCTG
CTGGGCCAGA ACGTGAACGC TTACCGCGGC GCCACGCATG ATGGCGATAT TTGCAGCTTT
GCCGAATTAC TGCGTCTGGT GGCGGCGATC GACGGTATTG ACCGTATTCG TTTTATTACC
AGCCATCCGA TTGAATTCAC CGACGACATC ATCAGCGTAT ACGAAGATAC GCCGGAGCTG
GTGAGCTTCC TGCATCTGCC GGTTCAAAGC GGTTCAGACC GCATTCTGAC GATGATGAAA
CGCCGCCATA CCGCACTGGA ATACAAAGCG ATCATCCGCA AACTGCGCAA GGCACGCCCG
TCTATCCAGA TCAGCTCCGA TTTTATCATC GGCTTCCCGG GCGAAACCCA GGAAGATTTC
GAACAAACCA TGCAATTAAT CGCCGATGTC GATTTCGACA TCAGCTTTAG CTTTATCTAC
TCCCCTCGCC CCGGTACTCC GGCCGCCGAC ATGGTGGACG ATGTGACCGA AGAGGAGAAA
AAACAACGCC TGTACATTCT GCAAGAGCGC ATTAATCAGC AGGCCATGCA GTACAGCCGC
CGGATGATGG GCACCGTGCA GCGTATTCTG GTTGAAGGCA CCTCGCGCAA GAACGTGATG
GAGCTGTCCG GCCGCACCGA AAATAACCGC GTGGTGAACT TCGAAGGCAC TCCCGACATG
ATCGGCAAGT TTGTCGACGT AGAAATCGTC GATGTTTACC CGAATTCATT GCGTGGCGTG
GTGGTGCTGA CTGAAGACCA GATGGATTTA CGCGTCAGCG AATCACCGAC ATCGGTCATC
GCCCGGACCC GTAAAGAAGA CGAACTCGGC GTCGGTATCT ATCAGCCGTA A
 
Protein sequence
MTMTKKLHIK TWGCQMNEYD SSKIADLLES THGYQLTDVA EEADLLLLNT CSIREKAQEK 
VFHQLGRWKT LKDVNPNLII GVGGCVASQE GEHIRDRAHY VDVIFGPQTL HRLPEMINHV
QGTRSPIVDI SFPEVEKFDR LPEPRAEGPT AFVSIMEGCN KYCTFCVVPY TRGEEVSRPA
DDVLFEIAQL AAQGVREVNL LGQNVNAYRG ATHDGDICSF AELLRLVAAI DGIDRIRFIT
SHPIEFTDDI ISVYEDTPEL VSFLHLPVQS GSDRILTMMK RRHTALEYKA IIRKLRKARP
SIQISSDFII GFPGETQEDF EQTMQLIADV DFDISFSFIY SPRPGTPAAD MVDDVTEEEK
KQRLYILQER INQQAMQYSR RMMGTVQRIL VEGTSRKNVM ELSGRTENNR VVNFEGTPDM
IGKFVDVEIV DVYPNSLRGV VVLTEDQMDL RVSESPTSVI ARTRKEDELG VGIYQP