Gene Dd1591_2906 details

Gene Information

• Locus tag: Dd1591_2906
• ID: 8118317
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: -
• Start bp: 3309461
• End bp: 3309865
• Gene Length: 405 bp
• Protein Length: 134 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644853277
• Product: acyl-CoA thioester hydrolase YbgC
• Protein accession: YP_003005207
• Protein GI: 251790486
• COG category: [R] General function prediction only
• COG ID: [COG0824] Predicted thioesterase
• TIGRFAM ID: [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family; [TIGR02799] tol-pal system-associated acyl-CoA thioesterase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.15122
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTAATA AAGTGTTCCG CTGGCCAGTA CGCGTCTACT ATGAAGATAC AGATGCAGGT 
GGTGTAGTTT ATCACGCGCG TTATGTGGCC TTCTATGAAC GAGCCAGAAC CGAAATGTTG 
CGCGCGCACG ATGTTCATCA GCGCGTACTC ATGAGTGAAC ATATCGCCTT TGCTGTTCGT 
AAAATGACGA TTGAGTATCT TGCCCCGGCG CGTCTTGACG ATTTACTGGA AGTGCAAAGC 
GAGATCGTTA AGATACGCGG CGCTTCCATG ACATTCGCAC AGCGCATTCT TGACTCGCAT 
GGCGCCCTGC TGAGCCATGC CGAGGTTTTA GTCGCATGTA TCGATCCATT TCAAATGAAG 
CCTGTTGCGC TTCCTAAGTC TATTGTCGCG GAGTTTAAGC AGTGA 

 

Protein sequence

MSNKVFRWPV RVYYEDTDAG GVVYHARYVA FYERARTEML RAHDVHQRVL MSEHIAFAVR 
KMTIEYLAPA RLDDLLEVQS EIVKIRGASM TFAQRILDSH GALLSHAEVL VACIDPFQMK 
PVALPKSIVA EFKQ