Gene Dd1591_2905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2905 
Symbol 
ID8118316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3308778 
End bp3309464 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content51% 
IMG OID644853276 
Productcolicin uptake protein TolQ 
Protein accessionYP_003005206 
Protein GI251790485 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02796] TolQ protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.045905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGACA TGAATATTCT TGATTTGTTC CTGAAGGCTA GCCTTCTGGT TAAACTTATC 
ATGTTAATTT TAATCGGTTT TTCCATCGCC TCCTGGGCGA TTATCATTCA GCGTACCCGT
ATTCTGAATG CTGCGACGCG TGACGCCGAA GCGTTTGAAG ACAAATTCTG GTCGGGAATC
GAGCTGTCTC GCCTTTATCA GGAAAGCCAG ACGCGTCGTG AAAATCTGAC GGGCACAGAG
CAGATTTTCT ATGCGGGCTT TAAAGAGTTT GCGCGGTTGC ATCGCGCCAA CAGCCATGCA
CCGGAAGCGG TGGTGGAGGG GGCGTCCCGC GCTATGCGCA TTTCCTTGAA CCGTGAACTG
GAAACGCTGG AAACGCATAT TCCTTTCCTC GGTACCGTCG GTTCCATCAG CCCTTATATT
GGTTTGTTTG GCACGGTATG GGGGATTATG CATGCGTTTA TCGCGCTGGG TGCGGTGAAA
CAGGCGACGT TGCAGATGGT AGCACCGGGT ATCGCAGAAG CGCTGATTGC TACCGCCATC
GGCTTGTTTG CGGCGATTCC GGCGGTCATG GCTTACAACC GGTTGAATCA GCGCGTTAAC
AAGCTTGAGC AGAACTACGA TAACTTCATG GAAGAGTTTA TTGCTATCCT GCATCGTCAG
GCTTTCTCCA GCGAAGGCAA CCGTTAA
 
Protein sequence
MTDMNILDLF LKASLLVKLI MLILIGFSIA SWAIIIQRTR ILNAATRDAE AFEDKFWSGI 
ELSRLYQESQ TRRENLTGTE QIFYAGFKEF ARLHRANSHA PEAVVEGASR AMRISLNREL
ETLETHIPFL GTVGSISPYI GLFGTVWGIM HAFIALGAVK QATLQMVAPG IAEALIATAI
GLFAAIPAVM AYNRLNQRVN KLEQNYDNFM EEFIAILHRQ AFSSEGNR