Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_2905 |
Symbol | |
ID | 8118316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 3308778 |
End bp | 3309464 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644853276 |
Product | colicin uptake protein TolQ |
Protein accession | YP_003005206 |
Protein GI | 251790485 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | [TIGR02796] TolQ protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.045905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACTGACA TGAATATTCT TGATTTGTTC CTGAAGGCTA GCCTTCTGGT TAAACTTATC ATGTTAATTT TAATCGGTTT TTCCATCGCC TCCTGGGCGA TTATCATTCA GCGTACCCGT ATTCTGAATG CTGCGACGCG TGACGCCGAA GCGTTTGAAG ACAAATTCTG GTCGGGAATC GAGCTGTCTC GCCTTTATCA GGAAAGCCAG ACGCGTCGTG AAAATCTGAC GGGCACAGAG CAGATTTTCT ATGCGGGCTT TAAAGAGTTT GCGCGGTTGC ATCGCGCCAA CAGCCATGCA CCGGAAGCGG TGGTGGAGGG GGCGTCCCGC GCTATGCGCA TTTCCTTGAA CCGTGAACTG GAAACGCTGG AAACGCATAT TCCTTTCCTC GGTACCGTCG GTTCCATCAG CCCTTATATT GGTTTGTTTG GCACGGTATG GGGGATTATG CATGCGTTTA TCGCGCTGGG TGCGGTGAAA CAGGCGACGT TGCAGATGGT AGCACCGGGT ATCGCAGAAG CGCTGATTGC TACCGCCATC GGCTTGTTTG CGGCGATTCC GGCGGTCATG GCTTACAACC GGTTGAATCA GCGCGTTAAC AAGCTTGAGC AGAACTACGA TAACTTCATG GAAGAGTTTA TTGCTATCCT GCATCGTCAG GCTTTCTCCA GCGAAGGCAA CCGTTAA
|
Protein sequence | MTDMNILDLF LKASLLVKLI MLILIGFSIA SWAIIIQRTR ILNAATRDAE AFEDKFWSGI ELSRLYQESQ TRRENLTGTE QIFYAGFKEF ARLHRANSHA PEAVVEGASR AMRISLNREL ETLETHIPFL GTVGSISPYI GLFGTVWGIM HAFIALGAVK QATLQMVAPG IAEALIATAI GLFAAIPAVM AYNRLNQRVN KLEQNYDNFM EEFIAILHRQ AFSSEGNR
|
| |