| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2904 |
|---|
| Symbol | |
|---|
| ID | 8118315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3308340 |
|---|
| End bp | 3308765 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644853275 |
|---|
| Product | colicin uptake protein TolR |
|---|
| Protein accession | YP_003005205 |
|---|
| Protein GI | 251790484 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | [TIGR02801] TolR protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.036935 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGTG CGCGTGGCGG CCGCCGGTCG CTGAAATCCG AGATTAATAT TGTTCCTCTT
CTGGACGTGT TGCTGGTGCT GTTGTTGATA TTCATGGCAA CAGCGCCGAT CATCACCCAA
AGCGTAGAAG TGGATCTGCC GGATGCAACC GAATCCAAGA CCGTATCCAG TAACGATAAT
CCTCCGGTGA TTGTCGAGGT ATCCGGTGTA GGGCAATACA GTTTGGTGGT TGATCATAAC
CGTATGAATC AACTGCCTGC GGAGCAGGTG GTGGCTGAAG CCCAGTCCCG CCTGACTGCA
AACCCGAAAA CGGTCTTTTT GATCGGGGGT GCCAAAGATG TTCCTTATGA TGAGATCATC
AAGGCGCTGA ATTTGTTGCA TCAGGCCGGT GTCAAATCTG TCGGGTTGAT GACGCAGCCG
ATTTGA
|
|---|
| Protein sequence | MARARGGRRS LKSEINIVPL LDVLLVLLLI FMATAPIITQ SVEVDLPDAT ESKTVSSNDN
PPVIVEVSGV GQYSLVVDHN RMNQLPAEQV VAEAQSRLTA NPKTVFLIGG AKDVPYDEII
KALNLLHQAG VKSVGLMTQP I
|
|---|
| |