Gene Dd1591_2857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2857 
Symbol 
ID8120553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand- 
Start bp3251522 
End bp3252058 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content54% 
IMG OID644853226 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_003005158 
Protein GI251790437 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.255465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTTC GTGATACCGC CATTCAGGGC GTCAAAATCA TCCAACCTAA GGTCTTTGGC 
GATGCACGGG GCTTTTTTCT GGAAACGTTT GAGAAAAAGC GCTACCAGGA GATGCTGGAT 
ATCGACCTGG ATTTTGTGCA AGACAACCAC TCCCGTTCGG CCAGAGGCGT GTTGCGCGGG 
CTGCATTTTC AGACCGTCAA TCCGCAAGGG AAACTGGTGC GCGTGGTGCG TGGCGAAGTA 
TTTGACGTCG TGGTGGATAT TCGGCCCGAC TCGGCGACAT ACGGTCGCTG GGAAGGGGTT 
CTCCTGTCGG AGGAGAATAA GGCCCAATTC TGGATCCCGC CCGGTCTGGC GCACGGTTTT 
GTGGTGCTCT CCGACCTGGC GGATTTCGAG TACAAGTGCA CCGACTACTA CAACCCGGCT 
CACGAAGGGT GCCTGTTATG GAATGATCCG GATATCGGCA TCGATTGGCC GATCGCCTCG 
CCTTTGTTAT CGGAAAAAGA TAGCAAAGGT AAAACATTTA AGGAGCTATG GGCATGA
 
Protein sequence
MQVRDTAIQG VKIIQPKVFG DARGFFLETF EKKRYQEMLD IDLDFVQDNH SRSARGVLRG 
LHFQTVNPQG KLVRVVRGEV FDVVVDIRPD SATYGRWEGV LLSEENKAQF WIPPGLAHGF 
VVLSDLADFE YKCTDYYNPA HEGCLLWNDP DIGIDWPIAS PLLSEKDSKG KTFKELWA