| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2854 |
|---|
| Symbol | |
|---|
| ID | 8120550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3248400 |
|---|
| End bp | 3249671 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644853223 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_003005155 |
|---|
| Protein GI | 251790434 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.444695 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATA AAAAGGCAAT AAAGCGCGAG GTTATCTATC TCTATATTAT CCAGATTTCC
AATATGCTGT TGCCGCTGGC GACCTTTCCC TATCTTGCCA GAGTGCTGGG CGCGGAGTTT
TTCGGCAAAC TCAGTTACGC GCAATCCATC AGCTTTATCG CGTTATTTAT TGTCGATTTT
GGTTTTAACT TTTCTGCGGC CAGAAAAGTC AGCGCCCAGG CCGGCGACAT CGCCGCCATT
AATGCCCTGT ACTCGAATGT GCAATGCGCC AAAGCCATAC TGTTGGTGTT GGTGATGGGG
GTGGGAACCA TTGTGGACCT GCTGACGGCG CAGTCGGAAA CGGACGCCAT CCTGTTCTTT
ATCGGCCTGG TGTCGTCGTT GAGTTCGTTG CTGTCGGCTG CCTGGTTATT TCAGGGGATG
GGGAAAAACT CCCATCTGGC TATTCTGAAC CTGATTTTCC GCATACTGGC GCTGGGGTTG
ATTTTCCTGT TGGTCAGTTC ACCGGCGGAT ATTTATCTGG CGGCGATTAT CCAACTGTTC
CCACCGGTGT TGGTCGGGCT GGTGATTCAA TACCACTTGC AGCGCCGTGA ATCGATACGC
TGGCGGTTGG CGGGCATCAA TCTGCACGGG GTGATGGCCG AAATCAGGGA AAGTTTTCAC
AATTTTTCCG CCTCATTGTT CACGTTGGGA TTCACTTATC TGAATCCTGT GGTGATCAAA
TTTATGTTCG GCGACGCCGC GCTCGGTCAT TATGCGGTGG CGGATAGGCT GGCATCGGTA
TTGCGCCAAT TGTATAACCC GATAGTACAA GGCAATTTCA GTCATATTTG CAGTTTGTAC
AACCGGCTGG CGTACAGCGC TATTCGCGCG CAGTTGATGA AGGTACTCAC GATGTTTTCA
TTGCTGACCG CCAGCGCGTT TTTGGGCAAT CTACTGATGG GGGCGCCGTT GATACACTGG
GTGTTCGGCA AGGAGTACGA TATTAGTCAC CTGCTGACCA TCATGATTGT CACGCAGTTT
GTGATCTCGT TGTCGATTAT TCTGGTTAAC TTGATCATTA TTCCCGCCGG ATTGAGCGTG
TATTTGAAGC GGGTCTATTT CATCGGCCTG TTGTGCCATT GCTCTTATCT GTTTTTCTTT
ACGCAATGGT GGGGCATGTA TGGTGTGGCC GTTGCGGTCG GGGCGACGGA GTTCATCATT
ACGGTGATCT TCTTTTTTAT GGTAATGAAA AAAAATATTT TGGGTACCCG AATATCAGGG
ATGCCTGAAT AA
|
|---|
| Protein sequence | MSDKKAIKRE VIYLYIIQIS NMLLPLATFP YLARVLGAEF FGKLSYAQSI SFIALFIVDF
GFNFSAARKV SAQAGDIAAI NALYSNVQCA KAILLVLVMG VGTIVDLLTA QSETDAILFF
IGLVSSLSSL LSAAWLFQGM GKNSHLAILN LIFRILALGL IFLLVSSPAD IYLAAIIQLF
PPVLVGLVIQ YHLQRRESIR WRLAGINLHG VMAEIRESFH NFSASLFTLG FTYLNPVVIK
FMFGDAALGH YAVADRLASV LRQLYNPIVQ GNFSHICSLY NRLAYSAIRA QLMKVLTMFS
LLTASAFLGN LLMGAPLIHW VFGKEYDISH LLTIMIVTQF VISLSIILVN LIIIPAGLSV
YLKRVYFIGL LCHCSYLFFF TQWWGMYGVA VAVGATEFII TVIFFFMVMK KNILGTRISG
MPE
|
|---|
| |