| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2850 |
|---|
| Symbol | |
|---|
| ID | 8120546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3243100 |
|---|
| End bp | 3244107 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644853219 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003005151 |
|---|
| Protein GI | 251790430 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTC TTGTTACCGG CGCGGCCGGC TTCATCGGCT TCTATACTTG TCAGTCACTC
TGCGCCGCCG GCCATACGGT GGTGGGGATC GATAACCTCA ATAGTTACTA TGAGGTATCG
CTCAAGGAAG CGCGGCTGGC GAAATTGCGT GCGCTGAGCG GTTTCCGTTT TGAACGGATA
GATATTGCCG ATAGCCAGGC GATGACGGCG TTGTTCGCGG CGGAAAAATT CGAGCGCGTT
ATTCATCTCG CCGCGCAGGC CGGGGTGCGT TATTCGCTGG AAAACCCGAT GGTGTATGCG
CAAAGCAACC TGATAGGTCA TTTGAATGTG CTGGAAGGCT GTCGCCACCA CGGCGTTGGT
CACCTGATTT ATGCCTCTTC CAGTTCGGTG TACGGGTTGA ACGGCAAAAC GCCGTTCGCC
ACCACCGACG CGGCCGACCA TCCGATTTCG CTGTATGCCG CGACCAAGAA ATCCAACGAG
CTGATGGCGC ACTCCTATTC GCACCTGTAC GACCTGCCGA CCACCGGATT GCGCTTTTTC
ACGGTATATG GACCGTGGGG ACGTCCGGAT ATGGCGCTGT TCAAGTTCAC TCGCCGCATT
CTGGCTGGCG AACCGATCGA TATCTACAAT CAGGGCGACA TGTGGCGTGA TTTCACCTAT
GTCACCGATA TCGTGGAAGG GGTGTTGCGT GTGGTGGACC AAATCCCGAC GCGTAACGCC
GACTGGACGG TGGAAGGCGG CTCGCCGGCC ACCAGTTCCG CGCCATACCG CCTTTACAAT
ATCGGTAACG GTAGCCCGGT GCGGCTGATG GATTTTGTCA CGGCGCTGGA GTCGGCGTTG
GGGCGTGAGG CAGTGAAAAA TTTCATGCCG ATGCAGGCCG GCGACGTTTA TCAGACTTAT
GCCGATACCA GCGACTTGTT TGCGGTGACA GGCTATCGGC CGCAGGTCGG TGTGAATGAA
GGGGTGCGCG CCTTCGTAGA CTGGTATCGG GATTTCTATC AGGCCTGA
|
|---|
| Protein sequence | MKFLVTGAAG FIGFYTCQSL CAAGHTVVGI DNLNSYYEVS LKEARLAKLR ALSGFRFERI
DIADSQAMTA LFAAEKFERV IHLAAQAGVR YSLENPMVYA QSNLIGHLNV LEGCRHHGVG
HLIYASSSSV YGLNGKTPFA TTDAADHPIS LYAATKKSNE LMAHSYSHLY DLPTTGLRFF
TVYGPWGRPD MALFKFTRRI LAGEPIDIYN QGDMWRDFTY VTDIVEGVLR VVDQIPTRNA
DWTVEGGSPA TSSAPYRLYN IGNGSPVRLM DFVTALESAL GREAVKNFMP MQAGDVYQTY
ADTSDLFAVT GYRPQVGVNE GVRAFVDWYR DFYQA
|
|---|
| |