| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2813 |
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| Symbol | |
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| ID | 8119816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 3194991 |
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| End bp | 3200012 |
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| Gene Length | 5022 bp |
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| Protein Length | 1673 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644853183 |
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| Product | YD repeat protein |
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| Protein accession | YP_003005115 |
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| Protein GI | 251790394 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAGA ATAAAAAAGC GACGCTGATA TCGAGCGAAG ACGCCGCCAA TCAAACCTTT
TCCACCGATA ACAAAATCTC CGGCGGGTGT GCCCAATGCG GCTGCGAAGT GCTGATTTAC
TACCATTACG ACTCGGGAAA ACCGGTGCCG AATGCGCCGT TTGTGTTGAC TGACAGCAAC
AAGACCGAGA TCCACGGCAA AACCGATGCC AACGGGCTGT GCCAAATCTA CGACATGGGC
TGCGGCACCT TCGAACTGAT GCTGGAGGAA GGCTCCGATG ATTTCACCCC CCGTGAAACC
GTAGAAAACA ACCCGGTATT ACAGTCGAAC CCGGCGTATG CCACGCTGGC GGGTGAGTAT
TTCACGCTGT TTCTATTGCT GCGCAAACAG GGCCTGGTGA ACTATGACGC CGACGACAGC
AGCGATCGCC ATGTCGATGT GGATGGCGCC GGGCTGTTTA CCTCTATCCC TCAAGAGTAC
CGCAAATCCT ATGACCGCTT CCGGGAGCTG GATAAACGGG TCAATCGCGG CGGCCGCGAG
CTGAAGCGGG CGGTCAATAA AATCCACCAC AGCCTGGCGG CGGAAGTGGC GGACAAAGGC
GGAGAGAGCA ACGCCGCGCT GATGCTGTTT TGCGAAATCG CGCTGGGGTT TATTCCGGTG
GTCGGGCAGG CCATGGATGT GTACGCGATA GGCGAGTGGA GCTGGCGGTC GTATCAAGAA
CCCGCCAGGC TGGAAGACCC GCTGCATATC GCCGAAGGCG CGCTCTGTGC GATCGGCGTG
ATCCCGGGGT TGGGCGATGC GTTGAAGGTC AGCGGACGGG CGATTATCCG TGCGCTCAAA
GAGGCCACCC CCAAAGAGCT GCAATTTGCC ATCAAAACTA TCCGCAGCCT GTCGGACGGT
AATCTGGTCA AAGGGCTGAC CCAATTGCAG GCCGAGCTGC GACATTACGG CGCGCAGGCC
AAAGCGCTGC TGCTGAAGAT CCATGCGGCG CTCAAACAGG TGCTGGCCGA GTCCGCGCGG
AAGAACAACT GGATTGTGTC GATGATGAAA GACAGCTTCA GCGCCATGAT CGCCGCGCTG
GAAAAGCTGA TTGCCAGGTA CGACGGCGCG TTGGCCTACA TCGAATCCCA ATTCAAAGTA
TTCATCGACA AGGTGGTGAC CCGCGTCAGC GGGAGTGCGC GGAAGAAGGG CAGCATTGCC
CGTGACGCCG CCGCGTCGAA AGCGCCGTCA CCGGCGGAAA GCCCGTCGGC CAAACCCGCC
GCGCAAAGCG AGAGCCCGCT CGCGGCGGGG GAGAAAACGG CTGGGATGCA GGCAGGCGGG
GGCAACAACG GAAAAGCGAC GTCGGCCAAA ACCGACGAAA AGAAAAACAC TCCCCCGGCG
GCAAAACCGA AAAACGCCGT CGGCAAGGAA AAAACACGTC AGTCATCGGA AGGGACGGAA
GACATCACCA CCGGGAGCAA CAAAGGCGAA CAGCCGGATA ATTCCCACCA ACAGGCGGCC
GCCGGGGAAA AAGATAAAAC GTGCAACGCC AACAGCAAAC ACTGCCAGAA TGAGGGCGAG
CCGGTGGATA TGGCGACCGG CTATGTGGTG GACTGGCGTA CCGATTTTAC GCAGAGCGGC
CTGCTGCCGC TGGCGATGAA ACGTTATTAC CGCTCGGGCG GCGAACGCCG GCCGGGCCTC
TTGGGGGCGC TGTGGCGCAG CAACTGGGAC ATGAGCCTGA CGCTGGACAA CGGTGTCGCC
ACGCTGACGG ACGGTGAGTT CAACCAGGCG GTCTTTGTCC TGCCCGAAGA GGGGGCGCAG
AGCCGGGCGC CGTCCAACCC GTCATGGCGG TTGTGCCGCC AGCAGGGGCA CCTGGTGTTG
CAGCACGTCG ACGGGCTGCG TTACCGCTTC GAGCACGCGT TGGGGCTGCA CCTGTGCCTG
ACCGCCATCG AAGACCGGGC GGGCCATCGC CTCACCTTCT TGTGGGACCG CGCCGACCTG
TGCTGGATTA GCCTGCCGGA CGGGCGTCTG GTCCACGTGG AAACGCAGCG GCGGCGGATA
ACCACACTGA CGCTGTGCGA CGAGCACCGC CAGCCGCTGA AAACGCTGGT CCGCTATCAG
TATGATGCAC AAGGCTACCT GCTGAACGTG CGGGCGGGGG AAGGGCGCAA TTTCGATTAT
CAGTACGCGC CGCAGGGCTG GCTGCTGCGC TGGTCGGATT TGGCGCACAC CTGGGTTGAG
CACGAGTACG ACGAACAGGG GCGCTCGCGG CGTGACCGCA CGGCAGACGG GTTCTGGCCG
GGCGAATTTC GTTACGACGA CGACGCCTTC ACCAGCCAGT ACCACAGCGG TTTTGGCGGC
GTCACCACCT ATGTGCGCGA TGCGCGCAAC AACATTCTGC TGCGCCGGGA GCCGGATGGC
GGGGAATACC GCTTCGAGTG GGTGGACAAC CAGCTGGCGG CGGAGAGTGA CCCGCTGGGC
GGGCGCACCG AATATCAGCG CAACGACTGG GGACAGGTGA CGGCGGTGAC CCTGCCGGAC
GGGGCGACGC ATCGCTATGA GTACGATGAT GACGGCCAGT TGCTGGCTTA TATCGACCCG
CTGGGCAGTG CGTGGCGTTA TACCCGCGAT GCGGCCGGGC GGGTGGACAC GGCGAGCGAC
CCGGAAGGGC GGACGTGGCA GCACCGCTAT TCGCCGCAGG GGTTGTTATC CGGCGTGACC
GGGCCGGACG GCCGGGTGCA GCGTTATCAC TACAACCGTC GCGGGCTGCT GGAGCGTCTG
GAGGCGGAAG GCACCTCGCC GGTGACCTTT TTCTACGACG GCCATGACCG GCTGACGGAG
CGGCATATTG CGCATGAACA GGGCGTGCAG GTGCGGCGGT GGGTGTACGA AGGCGGTCGT
GAGACGCCGG AGAAGGTGAT TTACGAAGAC GGCAGCGAAA CCCGGTTTGG TTACGACGGT
GAAGGGAACC TGACGTCGGT GACGGATGCG CTGGGCCAGC GTTACCAGTT CCGCTACGGC
GCGTTCGACA ACCTGCTGGA GGCGACGGAC CCGCTGGGGG CGAGCGTCCG CTATCATTAC
AATGCGGAGT CAGAATTCGC CGGGGTGACC AACAGTCAGG GGCAGACGTG GCAGTACCGG
TTTGACACGG CGGGCCGGCT CAGCGAGGAG CGGCATTACG ACGGCCGGGT GTACCGGTAT
GACTATGACG TGGCGGGGCA ACTGGCGAGC CGACAGGCAC CGGACGGCAG CCGACTGGTG
TACGGGTATG ACGCGGGTGG TCGGCTGAGC GCGATTGCGG CGGTACGGGC CGACGGGGCC
AGCGAGGGCA CGACGACCTT TGCCTATGAC CTGTCAGGGA GGCTGCTGAA GGCGGCGAGC
CCGGACGCGG TGGTAGAGTA TGCGTACAAC CGCGCCGGAC AGGTGGTGAG CGAGACGGTC
AACGGCGAGG CGGTGGCGTC GGGGTATGAC GCGGCGGGGC AGCGCAGTGC GGTGTCGGGG
CTGCTGGCGT CGCTGAGCCT GGGGTGGCAG GGTGGCCGGC TGACGACGCT GGGCATCGGT
TCGCACCAGC CGCTGACGTT CAGCCACACG GCGTCGGGGG AGGAGCAGCG GCGCAGCAAC
GGGTCGGGCT TCGCGCTGCG GCACGAGTGG AGTGCTGCGG GGCTGTTGTC GCGTCAGGCG
CTGGAAGGCG TGAGCGGGGT GCTGGAGCGG CGTTACCGGT ACGACGTACT GGACCGGCTG
ACGGGCCTCA GCGACAGTCA CTGGGGCGAG CAGGCGCTGC GGCTGAACGG GACGGGCCAG
GTGGTGGCGG AGCGTCGCGA GCAGGGTCGC CGGCAGCAGG CGCGGCTGTT TGGCTACGAC
AGCGAGCAGA ACCTGTGCGA GGTGTCGGCA ATCGAGCCGG ACGGGGCGGG CCGGCTGTCG
GCGAGCAATG CGGTGGTGCA GGCGTCATCG GGTTACGATG CGGCGGGCCG GGTGGTGGTG
CGTGGCGACA ACCGGTATCA GTACGACGCC TGCGGCCGGC TGGTGAGCAA ACGGGAAAGC
CGCGCCGGTT TCCGGCCGCG GGACACGCAG TTCGGGTGGG ATGCGCAGGA CCGGCTGGTG
CGGGTGAGTC TGCCGGACGG GTCGCGGTGG CGGTACCGTT ACGACGCGTT CGGCCGTCGA
ATCAGCAAGG TGCGCGAGGG CCAGGCGCCG TCGGCGCAGG CGGTAGCGCG GGTGGCGTAC
CGGTGGGACG GCGACCAACT GTCGGGCCAG ACGCAGTACC GTGCGGACGG CAGCGTGGCG
CGGGCGGTGC AGTGGGTGTA CGAGCCGGGG AGTTTCCGGC CGCTGGCGCA GGTGGAAGAG
AAGGGCGGGC GCACGCAACT GCACTACATC GTGACGGACC TGACGGGAAC GGCGCGGGAG
CTGTGCAGCG AGACGGGGGA GGTACACTGG CGGGGCGAGC AGGCGTTGTG GGGTGCGCAC
CGTGAAGAGA AAATCCCCAT TCCGCTGCGG CGCTGGCTGG GCGATGCAGC GAACGAGGCG
GTGTACTGCG AGCTGCGTTA TCAGGGCCAG GTATACGATA GCGAGACGGG GCTGTATTAT
AACCGGCATC GGTATTTTGA CCCTGAAACA GCGCAGTACC TGTCGGGAGA CCCTATTGGG
CTGGCAGGGG GGATAAGGCC GCAGGGGTAT GTAAACAATC CTTTTGAATG GGCTGATCCT
TTGGGATTAA ACCCAATTCC GCCGACATTT AAAGCGCAGT TTAGGGCAGC CAAAAGATCA
TTGAATATAC CGAAAAATGT TAATACACCT AAACCAGTAA AAGTATTTGA TAGTAAATAT
GAGAATAGAA CGGTATGGGA GTATGATGTG GATGGGAAGA AAAAATATAT TGTTATGCAC
GAAGAAGATA AATTTGGACG TGGCCCGCAT TTACATACTG CCGATGATTT ACATGGGAGT
CCTTTAGAGC CGAAAAATAG ATATAATCAG CATCCAGGGC ACTTCCCTGA AGATAAAGAA
GGCATAAAAG ATTTGCGAGG TGATAAATGT CCAAAACACT GA
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| Protein sequence | MSENKKATLI SSEDAANQTF STDNKISGGC AQCGCEVLIY YHYDSGKPVP NAPFVLTDSN
KTEIHGKTDA NGLCQIYDMG CGTFELMLEE GSDDFTPRET VENNPVLQSN PAYATLAGEY
FTLFLLLRKQ GLVNYDADDS SDRHVDVDGA GLFTSIPQEY RKSYDRFREL DKRVNRGGRE
LKRAVNKIHH SLAAEVADKG GESNAALMLF CEIALGFIPV VGQAMDVYAI GEWSWRSYQE
PARLEDPLHI AEGALCAIGV IPGLGDALKV SGRAIIRALK EATPKELQFA IKTIRSLSDG
NLVKGLTQLQ AELRHYGAQA KALLLKIHAA LKQVLAESAR KNNWIVSMMK DSFSAMIAAL
EKLIARYDGA LAYIESQFKV FIDKVVTRVS GSARKKGSIA RDAAASKAPS PAESPSAKPA
AQSESPLAAG EKTAGMQAGG GNNGKATSAK TDEKKNTPPA AKPKNAVGKE KTRQSSEGTE
DITTGSNKGE QPDNSHQQAA AGEKDKTCNA NSKHCQNEGE PVDMATGYVV DWRTDFTQSG
LLPLAMKRYY RSGGERRPGL LGALWRSNWD MSLTLDNGVA TLTDGEFNQA VFVLPEEGAQ
SRAPSNPSWR LCRQQGHLVL QHVDGLRYRF EHALGLHLCL TAIEDRAGHR LTFLWDRADL
CWISLPDGRL VHVETQRRRI TTLTLCDEHR QPLKTLVRYQ YDAQGYLLNV RAGEGRNFDY
QYAPQGWLLR WSDLAHTWVE HEYDEQGRSR RDRTADGFWP GEFRYDDDAF TSQYHSGFGG
VTTYVRDARN NILLRREPDG GEYRFEWVDN QLAAESDPLG GRTEYQRNDW GQVTAVTLPD
GATHRYEYDD DGQLLAYIDP LGSAWRYTRD AAGRVDTASD PEGRTWQHRY SPQGLLSGVT
GPDGRVQRYH YNRRGLLERL EAEGTSPVTF FYDGHDRLTE RHIAHEQGVQ VRRWVYEGGR
ETPEKVIYED GSETRFGYDG EGNLTSVTDA LGQRYQFRYG AFDNLLEATD PLGASVRYHY
NAESEFAGVT NSQGQTWQYR FDTAGRLSEE RHYDGRVYRY DYDVAGQLAS RQAPDGSRLV
YGYDAGGRLS AIAAVRADGA SEGTTTFAYD LSGRLLKAAS PDAVVEYAYN RAGQVVSETV
NGEAVASGYD AAGQRSAVSG LLASLSLGWQ GGRLTTLGIG SHQPLTFSHT ASGEEQRRSN
GSGFALRHEW SAAGLLSRQA LEGVSGVLER RYRYDVLDRL TGLSDSHWGE QALRLNGTGQ
VVAERREQGR RQQARLFGYD SEQNLCEVSA IEPDGAGRLS ASNAVVQASS GYDAAGRVVV
RGDNRYQYDA CGRLVSKRES RAGFRPRDTQ FGWDAQDRLV RVSLPDGSRW RYRYDAFGRR
ISKVREGQAP SAQAVARVAY RWDGDQLSGQ TQYRADGSVA RAVQWVYEPG SFRPLAQVEE
KGGRTQLHYI VTDLTGTARE LCSETGEVHW RGEQALWGAH REEKIPIPLR RWLGDAANEA
VYCELRYQGQ VYDSETGLYY NRHRYFDPET AQYLSGDPIG LAGGIRPQGY VNNPFEWADP
LGLNPIPPTF KAQFRAAKRS LNIPKNVNTP KPVKVFDSKY ENRTVWEYDV DGKKKYIVMH
EEDKFGRGPH LHTADDLHGS PLEPKNRYNQ HPGHFPEDKE GIKDLRGDKC PKH
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