| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2802 |
|---|
| Symbol | |
|---|
| ID | 8119805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3184501 |
|---|
| End bp | 3185730 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644853173 |
|---|
| Product | FHA domain containing protein |
|---|
| Protein accession | YP_003005105 |
|---|
| Protein GI | 251790384 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3456] Uncharacterized conserved protein, contains FHA domain |
|---|
| TIGRFAM ID | [TIGR03354] type VI secretion system FHA domain protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.824503 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACGAAA ACAACCCACT CACGCTGGTG GTGCTCAACA GCGAACAACT GGATATCAAC
TCGCAGGTGC AGCACCGCTT TGATCACCGC GGCGGCACGT TGGGCGCATC GGAAAAGGAT
CAGTGGCAAT TGCGCGACCG ACTGGGCGCG GTATTACCGG AACATGCGCG CATCGAATTA
CAAGACGGCC ATTTCTGCGT CTGCGACCTG AGCGGCCAGA CCTTCATCAA CGGCGCGTTG
TCGCCCATCG GCCGCGATCG CCGGGTACGG CTGGATCATG GCGATGAACT GGTGATTGGC
CCGTTCCGTC TGGGGGTTTA CCTCGAGGAT CCGGCGCGCG AGCAGGATAT CGATCAGGTA
CTGGGGCAGC GCCCCGGCGA TGTACTGGAA GGGTGGCTTG GCGAAGAACG ACGTAGTGCG
CCCGCCGATG AGACGGCGAT AGACCGATTT AACGACCCGT TGTGGGCGTT GCAGCAGGAA
CAGAGCCGCT CGCCGCTGGC AACGGAGGCT GAGCGCGGCG ATGAACTGCC GACCTCGCTT
TCTTCTTTTT CTGCCGTTGA GGACACCATG GATCAGAAAT TTGTGGAATT ACCGACCATT
GACAATCCGC ACATTGACAA GCCGCACGCC GGGGCGGGGC TGGGCGGGCA GGTGGACGCG
GTGACGCTGG CGCCGCTGCT GCGCGGGCTG GGCGTATCGC TCAATACCGG CGATGAGCAG
CAACTGCGCG ACATGCTCGA AGAGATGGGC AAAAGCCTCA AAGCAATGGT GGAAGGCTTG
CTGACGTTGC AGGCCGATCA GGCGGCGCTG GCGGACACCC ATCTACGGCC GATTGAAGAT
AACCCGCTGC GCCTGGGGCT GGATTACACC GATACGTTGT CGCTGCTGTT CGCCGACGAT
AAAAGCCCGG TGCACCTGTC CGCACCGGCC GCCATCAGCG AGGTGCTCAG CAATATGCAG
GCGCATCACC GGGCCAACCA GCAGGCGATC GCCGTGGCGC TGGAAAGCAT TTTGCAGGCG
TTTTCTCCGG CGGCGCTGCT GGGGCGTTTC GAGCATTACC GCCGCAGCGG CGAGCGTCAG
GCGCTGGACG ACGGCTGGGC GTGGCAGATG TACCAGCACT ATTACCGCGA GCTGACCTCA
CCGCGTCAGC AAGGGTTTCA GAAACTGTTC CATCAGGTGT ATGCGCAGGC GTATGACCGC
GCCGTTCGTC AGCAACAGGA GCAGAAATAA
|
|---|
| Protein sequence | MNENNPLTLV VLNSEQLDIN SQVQHRFDHR GGTLGASEKD QWQLRDRLGA VLPEHARIEL
QDGHFCVCDL SGQTFINGAL SPIGRDRRVR LDHGDELVIG PFRLGVYLED PAREQDIDQV
LGQRPGDVLE GWLGEERRSA PADETAIDRF NDPLWALQQE QSRSPLATEA ERGDELPTSL
SSFSAVEDTM DQKFVELPTI DNPHIDKPHA GAGLGGQVDA VTLAPLLRGL GVSLNTGDEQ
QLRDMLEEMG KSLKAMVEGL LTLQADQAAL ADTHLRPIED NPLRLGLDYT DTLSLLFADD
KSPVHLSAPA AISEVLSNMQ AHHRANQQAI AVALESILQA FSPAALLGRF EHYRRSGERQ
ALDDGWAWQM YQHYYRELTS PRQQGFQKLF HQVYAQAYDR AVRQQQEQK
|
|---|
| |