Gene Dd1591_2796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2796 
Symbol 
ID8119799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp3177094 
End bp3177657 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content67% 
IMG OID644853167 
Producttype VI secretion-associated protein, VC_A0118 family 
Protein accessionYP_003005099 
Protein GI251790378 
COG category 
COG ID 
TIGRFAM ID[TIGR03360] type VI secretion-associated protein, VC_A0118 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCTGA CGATGGTGCC GCTGCTGATG GCGGCAGTCG GTTCGCCCGA CCCGGCCTGG 
CAATCGCTGT GGGAACAGTG CCGCAACGAG ACCTCGCCGC AGGTGCGCCT GGCCTGTTAC
GACGCGCTCG GGCGCGAGAC GGAACGCGCG AGCGCCTTGC CGCCCGAGAC AAATAAAAGC
GGCGCGGGGG AGAACGCGTT TCGTCTCAAC CGCGAGGCGG CTAATGGCGA TATCACCCTG
ACCAGGACGC TGGCGGACGG CAACACGCTG GTGATCAGCT GCGCCAGCAG CATTACCCAT
CTGCGGCTGA CGCTCAGCCA GCCGTGGCCG GGCGACAACA TCACCTCCCA GCTTGACGGC
GCCAGCGCGC CGGATAACTG GTTTGTGCGT AACCGCGGCA CCTTGCTGGA ATTTGGCCGC
GGCCTGCCGG CGATCGACGC GCTCAAGCGC TGGGTCGGCC ACCATGAGCT GGTGCTGAAT
GGCGAGCAGG ATCACGCGTT GCGCATCGAT CTCACCGGGC TGGGCGAGGC GCTGGCGCCG
TTGCGTCAGC AGTGCCGCTG GTAG
 
Protein sequence
MMLTMVPLLM AAVGSPDPAW QSLWEQCRNE TSPQVRLACY DALGRETERA SALPPETNKS 
GAGENAFRLN REAANGDITL TRTLADGNTL VISCASSITH LRLTLSQPWP GDNITSQLDG
ASAPDNWFVR NRGTLLEFGR GLPAIDALKR WVGHHELVLN GEQDHALRID LTGLGEALAP
LRQQCRW