| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2765 |
|---|
| Symbol | |
|---|
| ID | 8119768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 3136710 |
|---|
| End bp | 3137405 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644853136 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003005068 |
|---|
| Protein GI | 251790347 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1346] Putative effector of murein hydrolase |
|---|
| TIGRFAM ID | [TIGR00659] conserved hypothetical protein TIGR00659 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCATG ATATCGTCTG GTCACTGCCA TTAACGCTGC TGGTGTTCTT TTTAGCGCGT
CGGCTGGCGC AGCGGCTGAA TTCACCGTTA CTCAACCCGT TACTGGTTTC GATGGGGGTG
CTGATAGCGT TTCTGCTGAT AAGCCACATT CCGTATGAGC GCTATTTCCA CGGCAGCGCG
GTGCTGAACA GCCTGCTGCA ACCGGCGGTG GTGGCGCTGG CGTTTCCGCT GTATGAACAG
TTGCACCAGA TCCGCCTGCG CTGGAAGTCG ATCATCAGCG TCTGTTTTAT CGGCAGCGTG
GTGGCGATGG TGACCGGCAC CTGGATTGCG CTGCGGCTGG GCGCCACACC GGCGATTGCC
GCCTCGATCA TGCCGAAATC GGTCACCACG CCGATCGCCA TGGCGGTGGG CGGCAGTATC
GGCGGGATTC CGGCCATCAG CGCGGTGTGC GTGATCTTTG TCGGCATCCT CGGCGCGGTA
TTCGGCCACA CGCTGCTCAA CGCCATGCGC ATTCATACCA AAGCGTCGCG CGGGCTGGCG
ATGGGCACCG CTTCGCACGC GCTCGGCACC GCCCGCTGCG CCGAGCTGGA TTATGAAGAA
GGCGCGTTCA GTTCGCTGGC GCTGGTGATC TGCGGCATTA TTACTTCGCT GATGGCTCCG
CTGTTGTTTC CGTTGTTGGT CGTGCTGGCG AAATAG
|
|---|
| Protein sequence | MWHDIVWSLP LTLLVFFLAR RLAQRLNSPL LNPLLVSMGV LIAFLLISHI PYERYFHGSA
VLNSLLQPAV VALAFPLYEQ LHQIRLRWKS IISVCFIGSV VAMVTGTWIA LRLGATPAIA
ASIMPKSVTT PIAMAVGGSI GGIPAISAVC VIFVGILGAV FGHTLLNAMR IHTKASRGLA
MGTASHALGT ARCAELDYEE GAFSSLALVI CGIITSLMAP LLFPLLVVLA K
|
|---|
| |