| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2730 |
|---|
| Symbol | |
|---|
| ID | 8119172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3096383 |
|---|
| End bp | 3097276 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644853101 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_003005034 |
|---|
| Protein GI | 251790313 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0972746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAATA ACATTGAAAC CAAGTGGTTA TATGATTTTA TCGCTCTGGA GGCGTTTCGC
AGTTTCACAC TGGCGGCCGA GACGCGTAAC ATTTCCCAGT CATCGTTCAG CCGGCGTATC
CGGGCGCTGG AAGAAGCGGT AGGGTTCGAC CTGTTTGACC GAGGCGCGCA ACCGCTACAA
TTGACCGAAC AGGGCAAAAT TTTCCACGCC CACATCCGCA ATACCCTCGA CGATCTGGAG
TACCAGATTC ACAAACTGCA CGGCGGCAGC CACTACAAAA ACAAGATTAG CATTGCGGCG
GCGCATTCGT TGTCGGTGTT CGTGATGCCG GAACTGCTGA AAAACGTGCC GGACTTGCAG
GAGAAAATCT TCTATGTCGA GTCGATTGAT GTCGATGATG CGGTACTTAA CCTGAAGGAG
GGGCGCAGCG ATTTTATTTT TTCGTTTTAT AACGAGGAGC TGATGTCGGA GCCGTTTCGC
CATACCCGCA TCATGGATTC CACGTTATAC CCGGTTTGCG CCTGCGATGT GGCCGGCAAA
CCGTGTTTTG ATGTGCGGGC CGCCACATTG CCGCTGCTCA ACTACACCGA CACCAGTTAT
ATGGGCCGTC AGGTCAATCG TTATCTCTCC ACGCTGCCGC CCGAACGTTT TACCGTCAGT
TTTGTCTCCT CAATGAGTGA CTTGCTCAGG CGTATGGTGA AACAGGGGCT GGGCATTGCC
TGGCTGCCCG ATTATTCCAT CGGTGATGAA CTGGCGCACA ACCAACTGGT GGTGCTGAAA
CTGGATAACG CCGTGATGAA GATGCCGGTG TATTTGTATC GGCTGGATGC CCGGCTGAAC
GTGGCGTCGG AGTCATTCTG GCGAGCGATG ACGGCGCTGC GCCCGGCTCC ATAA
|
|---|
| Protein sequence | MLNNIETKWL YDFIALEAFR SFTLAAETRN ISQSSFSRRI RALEEAVGFD LFDRGAQPLQ
LTEQGKIFHA HIRNTLDDLE YQIHKLHGGS HYKNKISIAA AHSLSVFVMP ELLKNVPDLQ
EKIFYVESID VDDAVLNLKE GRSDFIFSFY NEELMSEPFR HTRIMDSTLY PVCACDVAGK
PCFDVRAATL PLLNYTDTSY MGRQVNRYLS TLPPERFTVS FVSSMSDLLR RMVKQGLGIA
WLPDYSIGDE LAHNQLVVLK LDNAVMKMPV YLYRLDARLN VASESFWRAM TALRPAP
|
|---|
| |