Gene Dd1591_2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2727 
Symbol 
ID8119169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand- 
Start bp3094463 
End bp3095104 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content62% 
IMG OID644853099 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003005032 
Protein GI251790311 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0989177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTACAAA ATAAAAAGCA AGGGGGCCCT CGCCCCCGCG GACGCCCGCG AAAATTCAAT 
GAGGCCGAGG TTGTGGAACG AGCGCGTGAC GTGTTTTGGA ATTACGGGTA TGCCGCAAGC 
TCGCTGGATG ACCTCGCCGC AGCGACCGGG CTCAACCGCC CAAGTCTCTA TGCGGCCTTC 
GGCGACAAGC ATGCGCTGTA CCTGCGCGCG CTTGAGGAAA ACCGTGTGTG GTCGGTCGAG 
GGGATTCGGC TGCGCATGAC CGGCACCAAG CCCCTGCGTG AATTGCTCCG AGACTTTCTG 
ATCGAGGCAG CGGAGAGCAC GCTGGCAGGA GCTATGGGGG CGCGAGGATG TTTCATTGTC 
TGCACGGCGG TAACCGAGTC GCTTCGCGAT CCCAAAACGC GCGCCATCGC GGCGGGTTAT 
GTCGCCGATG TTGACCGTGC TTTTCGCGAA CGATTCGAGC GATCAAAAGA TGAACTTAAT 
GTTGGCGTGG ACCCCTCATC TGCCTCCGCC GTGGCGTCGG CGATGTTGCA GACGCTGGCA 
GTGCGGGCGC GGACTGGCAG TGGACGCGAA GAACTGGTGT GCATCGTGGA CGCCGCCGTC 
ATTGCGATCT GCGGTCAGGC CGGCGGGGGA GTTAGGTCGT GA
 
Protein sequence
MVQNKKQGGP RPRGRPRKFN EAEVVERARD VFWNYGYAAS SLDDLAAATG LNRPSLYAAF 
GDKHALYLRA LEENRVWSVE GIRLRMTGTK PLRELLRDFL IEAAESTLAG AMGARGCFIV 
CTAVTESLRD PKTRAIAAGY VADVDRAFRE RFERSKDELN VGVDPSSASA VASAMLQTLA 
VRARTGSGRE ELVCIVDAAV IAICGQAGGG VRS