| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2722 |
|---|
| Symbol | |
|---|
| ID | 8119164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 3087326 |
|---|
| End bp | 3088534 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644853095 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_003005028 |
|---|
| Protein GI | 251790307 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000390444 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGAC TGACCAATGA TGAATTACTG GCTCTGTTGA ATGATACAGA GTCAGATCGT
GCTGAACGTA AAGAAACATT TAAGGGCGAT GTTCCTAAGA AAGCACGTCA GGCAGTCTGC
GCTTTCGCTA ACGATTTGCC AGGGTATAAC CAGCCTGGAG TATTATTCAT CGGCGCGAAA
GATAATGGTG ACCCCAGCAA TCTGGAAATC ACTGATCAAC TACTGTTGTC TTTGGCGGAT
ATGAAAACAG ATGGAAACAT CCTACCTTTA CCTGTTTTAA CGGTTGAAAA GCGAACGCTC
AAAGGCAAGG ATATCGCAGT AGTAACCGTC ATTCCTTCCG ACATGCCACC AGTAAAGTAT
GAAGGCCGCA TCTGGATACG CACTGGCCCC CGGCGTTCAA TTGCCAATGC CCAAGAAGAA
CGTGTGCTAA ACGAGAAACG CCGTTATAAA AATTTACCCT TTGATATTTA TCCGCTCCCC
ACTGCAAGGC TAAGTGATTT ATCTCGAATG ATTTTTGAAA GTGAATATTT GCCACAAGCA
TTTGCCGACG ATGTTCTGGA AGAAAATGGG CGAAGTTATG GAGAGCGTCT GGCGTCGTGT
CGTATGATTG TATCTCCTGA AGATACAACG CCAACAGTCC TCGGTTTGCT TGCACTAGGA
AAAAGCCCGC AAGATTTTCT GCCTGGTGCC TATATTCAGT TTTTGAGGAT AGACGGCACA
GAACTTGCCG ACCCAGTTAT TGATGAAGAA GAAATCAATG GCAGCATTGT CGACATGCTC
CGCCGAACAG AAGAAAAGCT AAAAGCGCAC AACCGCTCAG CGGTGGACAT TACCTCACAC
GCAACCCATC TGATTTCATC ACCCTACCCG CAAGCTGCGC TGCAACAGAT TCTCTATAAC
GCTGTTCTAC ACAGAACTTA CGAGAGTACT AATGCACCTA TTCGTGTGTA TTGGTTTAAT
GATCGTATTG AAATCAATAG CCCTGGTGGT CCCTACGGTA ATGTCACTCC AGAAAACTTT
GGTCAACCCG GTGTGACAGA CTACCGTAAT CCTAATATTG CCGATGTGTT AAAGACATTT
GGCTTTATAC AGGCTTTTGG TCGCGGTATC GCTACCGCCA GACGGGAGAT GGATAGGAAT
GGTAATCCAC CTCTGGAATT TGAGACAAAC CAGACAGCAG TGGTCTGTCT TTTGCGAGGT
AAACCATGA
|
|---|
| Protein sequence | MPRLTNDELL ALLNDTESDR AERKETFKGD VPKKARQAVC AFANDLPGYN QPGVLFIGAK
DNGDPSNLEI TDQLLLSLAD MKTDGNILPL PVLTVEKRTL KGKDIAVVTV IPSDMPPVKY
EGRIWIRTGP RRSIANAQEE RVLNEKRRYK NLPFDIYPLP TARLSDLSRM IFESEYLPQA
FADDVLEENG RSYGERLASC RMIVSPEDTT PTVLGLLALG KSPQDFLPGA YIQFLRIDGT
ELADPVIDEE EINGSIVDML RRTEEKLKAH NRSAVDITSH ATHLISSPYP QAALQQILYN
AVLHRTYEST NAPIRVYWFN DRIEINSPGG PYGNVTPENF GQPGVTDYRN PNIADVLKTF
GFIQAFGRGI ATARREMDRN GNPPLEFETN QTAVVCLLRG KP
|
|---|
| |