| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2701 |
|---|
| Symbol | |
|---|
| ID | 8119143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 3064919 |
|---|
| End bp | 3066280 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644853075 |
|---|
| Product | anaerobic C4-dicarboxylate transporter |
|---|
| Protein accession | YP_003005008 |
|---|
| Protein GI | 251790287 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
|---|
| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases
[TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGTA ATGGGGAATC TATGGACTTT ATCATTCAAC TTGTCATAGT CCTGATCTGC
CTGTTTTACG GTGCGCGAAA AGGCGGTATC GCGCTCGGAT TATTAGGGGG TATCGGGCTC
GTCATTCTGG TTTTCATTTT CAAGCTGGAA CCTGGGAAAC CACCGGTGGA TGTGATGCTG
GTCATCATCT CCGTGGTGGC TGCGTCTGCT ACGTTGCAAG CCTCCGGCGG CCTTGATGTC
ATGCTGCAGG TCGCGGAAAA AATGCTGCGG CGTAACCCGA AATATGTGTC GATTATTGCG
CCCTTCGTCA CCTGCATATT GACCATGCTG TGCGGCACCG GCCATGTGGT GTATACCATC
CTGCCGATTA TTTATGACGT CGCCATCAAG AATAACATCC GCCCGGAACG GCCGATGGCC
GCCAGCTCGA TCGGCGCGCA GATGGGGATT ATCGCCAGCC CGGTATCGGT AGCGGTGGTG
TCGCTGGTCG CCATGCTCGG CAAGTTTACC TTCCACGGTA AGCACCTCGA GTTTCTGGAC
TTACTGGCCA TCACGATTCC TTCTACCCTG CTGGGTATTC TGGCCATCGG GATTTTCAGT
TGGTTCAGGG GTAAAGATCT GGATAAAGAC CCGGATTTCC AGAAATTCAT TTCCGTACCG
GAGAACCGTG AGTACGTCTA CGGCGACACC GCCACCCTGC TGGACCGCAA ACTGCCGCGC
AGCAACTGGG TCGCTATGTG GATCTTCCTG GCCACCATCG CCGCGGTAGC GCTGCTGGGG
GCGGTAGAAA GCCTGCGCCC AACCTTCGGC GGCAAACCGC TGTCGATGGT GTTGGTGATT
CAGATGTTCA TGCTGTTATC CGGCGCCATC ATCATTATCG CCACCAAAAC CAATCCAGGG
TCGATTTCGA AAAACGAAGT GTTCCGGTCT GGGATGATCG CAATTGTCGC GGTGTACGGT
ATCGCCTGGA TGGCGGAAAC CATGTTCGGC GCACACCTGG CGGAAATCAA GGAAACGCTG
GGCACGCTGG TGAAAGATTA CCCGTGGGCG TATGCGCTGG TCCTGCTGCT GGTGTCCAAG
TTCGTCAACT CACAGGCCGC CGCACTGGCT GCTATCGTAC CGGTCGCCCT GGCGATTGGC
GTTGACCCGG CGTACATCGT GGCGTCGGCG CCGGCCTGCT ACGGTTACTA CATTTTGCCG
ACTTACCCCA GCGATCTGGC TGCCATCCAG TTTGACCGCT CCGGTACTAC CCACATCGGC
CGGTTTGTGA TTAACCACAG TTTCATCCTG CCGGGCCTGA TTGGCGTCAG CACCTCCTGC
GTATTCGGCT GGGTGTTCGC CGCCATGTAC GGGTATTACT GA
|
|---|
| Protein sequence | MLSNGESMDF IIQLVIVLIC LFYGARKGGI ALGLLGGIGL VILVFIFKLE PGKPPVDVML
VIISVVAASA TLQASGGLDV MLQVAEKMLR RNPKYVSIIA PFVTCILTML CGTGHVVYTI
LPIIYDVAIK NNIRPERPMA ASSIGAQMGI IASPVSVAVV SLVAMLGKFT FHGKHLEFLD
LLAITIPSTL LGILAIGIFS WFRGKDLDKD PDFQKFISVP ENREYVYGDT ATLLDRKLPR
SNWVAMWIFL ATIAAVALLG AVESLRPTFG GKPLSMVLVI QMFMLLSGAI IIIATKTNPG
SISKNEVFRS GMIAIVAVYG IAWMAETMFG AHLAEIKETL GTLVKDYPWA YALVLLLVSK
FVNSQAAALA AIVPVALAIG VDPAYIVASA PACYGYYILP TYPSDLAAIQ FDRSGTTHIG
RFVINHSFIL PGLIGVSTSC VFGWVFAAMY GYY
|
|---|
| |