| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2686 |
|---|
| Symbol | |
|---|
| ID | 8119128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3050762 |
|---|
| End bp | 3051511 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644853060 |
|---|
| Product | phosphonate metabolism protein PhnP |
|---|
| Protein accession | YP_003004993 |
|---|
| Protein GI | 251790272 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
|---|
| TIGRFAM ID | [TIGR03307] phosphonate metabolism protein PhnP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.188088 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA TGTTTATGGG CACCGGCGAC GCGCAGCAGG TGCCGCTGAC CGGTTGCGAC
TGTATCGCCT GCGAACGCGC ACGGCGGGAC TCGCGTTTTC GGCGCGGGCC GAGCAGCCTG
CTGGTTCAGT GCGGCGGTGA GGTGACCTTG CTGGATGCCG GTGTGACGCA ACTGGAGCAG
CGCTTCGGTG CCAACGAGAT TCGCCGCATC CTGCTGACGC ATTACCATGT TGACCATGTG
CAGGGGCTGT TTTCGCTGCG CTGGGGCATC GGCGACCGTA TTCCGGTGTT CGGCCCGCCG
GATGAACAAG GCTGCGACGA TCTGTACAAG CATCCGCGGC GGCTGGATTT TCAGCCGGCG
ATGACGCCGT TTCAAACGAT GACGATGGGG GCAATGCAGG TAACGGCGTT GCCGCTGACG
CACTCCAGGC CGACCTTTGG CTACCTGCTG GAGCAGGGAA ATCACGCGGT GGCTTACCTG
ACCGACACCT GCGGGCTGCC GGATGACACG CTGGATTTTC TGCGCGGCAA ACGGCTCGAC
CACATGGTGA TGGACTGCAC CCAGCCGCCG CGCGACACGC CGCCGCTCAA CCACAGCGAC
CTGAATACCG TATTGCGGAT ACGTGAATTG TTGCGGCCAA CGCAAACCTG GCTGACCCAC
CTCAGCCACG AAACCGACGC CTGGCTGATG CAAAACACCT TGCCGGATGG CGTGCAGGCC
GCCGCCGATG GGATGTGGAT TCGGCTTTAG
|
|---|
| Protein sequence | MKLMFMGTGD AQQVPLTGCD CIACERARRD SRFRRGPSSL LVQCGGEVTL LDAGVTQLEQ
RFGANEIRRI LLTHYHVDHV QGLFSLRWGI GDRIPVFGPP DEQGCDDLYK HPRRLDFQPA
MTPFQTMTMG AMQVTALPLT HSRPTFGYLL EQGNHAVAYL TDTCGLPDDT LDFLRGKRLD
HMVMDCTQPP RDTPPLNHSD LNTVLRIREL LRPTQTWLTH LSHETDAWLM QNTLPDGVQA
AADGMWIRL
|
|---|
| |