| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2682 |
|---|
| Symbol | |
|---|
| ID | 8119124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3046705 |
|---|
| End bp | 3047637 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644853056 |
|---|
| Product | phosphonate ABC transporter, periplasmic phosphonate binding protein |
|---|
| Protein accession | YP_003004989 |
|---|
| Protein GI | 251790268 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00143735 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA CCTTTACGTT GACCACCTTG CTGGCCGGTG CGGTAGTGTC CGCCAGCGTA
TTCGCCGCAC AAACACCGCA AACCCTGAAT CTGGGCATTT TGGGCGGGCA GAACGCTACC
CAGCAAATCG GCGATAACCA GTGCGTCAAA CAGTTTCTGG ATAAAGAGCT GAATGTGGAT
ACGCAAATGC GTAACTCATC CGATTACGCC GGCGTGATTC AGGGGCTGCT GGGGAAGAAG
ATTGATCTGG TATTGAGCAT GTCGCCGTCG TCTTATGCGT CGGTCTATAT CAAAGATCCC
AACGCGGTGG ATGTGGTCGG CATCGTGGTG GATGACGCCG ACCAGTCGCG TGGTTACCAC
TCGGTGGTGA TCGTCAAAGC CGACAGCCCC TACCAGAAGC TGGAAGACCT GAAAGGCAAG
GCGTTCGGTT TCGCCGATCC GGATTCTACC TCCGGCTACC TGATCCCGAA TCAGGCGTTT
AAAGAAAAAT TCGGCGGCAA CCCGGATAAC AAGTACAACA ACTTTTTCTC CAGCGTGACC
TTCTCCGGCG GCCACGAGCA GGACATCCTC GGCGTGCTGA ACGGCCAGTT CGACGGCGCG
GTGACCTGGG CATCGATGAT TGGCGACTAC AACACCGGCT ATACCAGCGG CGCGTTCGGC
CGTCTGATCC GCATGGACCA CCCGGACCTG ATGAAGCAGA TTCGCATCAT TTGGCAATCG
CCGTTGATCC CGAACGGCCC GATTCTGGTG AGCAACGCGC TGCCCGCTGA ATTTAAAGCC
AAACTGATTA CCGCGGTGAA GAAGCTGGAT AAAGACGATC ACTCGTGCTT TGTGAAAGCC
GTCGGCGGCA AGCAACACAT CGGCCCGGCC ACGGTAGACG ATTACAAAAC CATTATCGCC
ATGAAGCGTG AGCTGACCAA AGGCAACCGC TAA
|
|---|
| Protein sequence | MKKTFTLTTL LAGAVVSASV FAAQTPQTLN LGILGGQNAT QQIGDNQCVK QFLDKELNVD
TQMRNSSDYA GVIQGLLGKK IDLVLSMSPS SYASVYIKDP NAVDVVGIVV DDADQSRGYH
SVVIVKADSP YQKLEDLKGK AFGFADPDST SGYLIPNQAF KEKFGGNPDN KYNNFFSSVT
FSGGHEQDIL GVLNGQFDGA VTWASMIGDY NTGYTSGAFG RLIRMDHPDL MKQIRIIWQS
PLIPNGPILV SNALPAEFKA KLITAVKKLD KDDHSCFVKA VGGKQHIGPA TVDDYKTIIA
MKRELTKGNR
|
|---|
| |