| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2670 |
|---|
| Symbol | |
|---|
| ID | 8119112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3028925 |
|---|
| End bp | 3029743 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644853044 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_003004977 |
|---|
| Protein GI | 251790256 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAAC GGGTTATTAC CCTGTTTCAG GGCGCCACGG ATACCGCGGT AGCGCTGGGC
GTCACCCCCG CCGGGGTGGT GGATTCGTGG AGCGAGAAGC CGATGTACCG CTACCTGCGC
CCGGCGCTGG CCGGAGTGCC GCATGTGGGG CTGGAGACCC AGCCTAGTCT GGAAGACATC
GTATTGTTAA AACCGGATAC CATCGTCGCT TCACGTTTTC GTCACCAGCG GCTGGAGCCG
CTGTTGTCGC AGATTGCGCC GGTGGTAATG CTGGATGAAA TCTACCAGTT CAAAAAAACG
GTGCAGGTGA TGGGGCAGGC GCTTGGGCGT CAGGCGGTGG CCGACACGTT GCTGCAACAC
TGGCAGCAAC GGGTGACCGG GCTGCGTGAG CAACTGCAAC GCCGCTTTGG CGGCAGCTGG
CCGCCCAGCG TATCAATACT GGATATCCGC GAAGACCATA TCCGTAGCTA TTTGCCCGGC
AGCTTTCCCG GCTCGGTGCT GAGCGAGCTG GGGTTTGGCT GGAGCGACGC CAGCCGCGCT
CAGCCGGGCG TTTCTCTCAA ACTGACCAAC AAAGAGAGCA TCCCGGTGGT GGATGCCGAC
ATCTTTTTCA TTTTTCTGCG ATCCGAGAGT CCTTCTGTGC AACGCAACTA TGAATCCCTG
ATTCGTCACC CGCTGTGGCG GCAACTCCGC GCCCCGCAGC GCAATCAGGT ATGGGTGGTC
AATGGCGTCA CCTGGAGTCT GTCCGGCGGT ATTCTGGGCG CCAACATGAT GCTGGACGAT
ATCGCCCGGG TCACCGGCAT CGCCGGAGGC GCGTCATGA
|
|---|
| Protein sequence | MPQRVITLFQ GATDTAVALG VTPAGVVDSW SEKPMYRYLR PALAGVPHVG LETQPSLEDI
VLLKPDTIVA SRFRHQRLEP LLSQIAPVVM LDEIYQFKKT VQVMGQALGR QAVADTLLQH
WQQRVTGLRE QLQRRFGGSW PPSVSILDIR EDHIRSYLPG SFPGSVLSEL GFGWSDASRA
QPGVSLKLTN KESIPVVDAD IFFIFLRSES PSVQRNYESL IRHPLWRQLR APQRNQVWVV
NGVTWSLSGG ILGANMMLDD IARVTGIAGG AS
|
|---|
| |