| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2659 |
|---|
| Symbol | |
|---|
| ID | 8119101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 3017124 |
|---|
| End bp | 3018146 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644853034 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003004967 |
|---|
| Protein GI | 251790246 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTGA AACAGATTGC AAAAACGCTG GGGTTGTCGG TCACGACCGT CAGCCGGGCG
CTGAACGGCT ACGATGACGT AGCCGCCGAG ACGCGCCAGC GGGTAGAAGA CGAGGCGCGA
CGCCTCGGCT ATCGCCCCAA TACCTTTGCT CGTCGTCTGA AAATGGGGCG CATTGATGCG
GTTGGCTTGG TGTTCCCGTT GCAACCCGCA CCGCTCAGCA ATACCACCTT TATGGAAATG
GTGGCGGAAA TCAGTCATGA GCTGGCGAAG CAGGAGATCG ACCTGCTGTT GATCGCCGAC
GAAGGGCAGG CCGGGAGCCA CGCGTTTTTG CGCATGATTG AAAGCCGCCG GGTGGATGCG
TTAATCGTCG CGCATACCCT GCAACAGGAC CCGCGCCTGC AATACCTGCA ATCGATCGGC
TTTCCGTTTC TGGCGCTTGG GCGCAGCGAT TTGCCGCTGC CTTATGCCTG GTTCGATTTC
GACAATCAGG CCGGCGCGGC GCTCGCCACC CGCCATTTGA TCGCCCTCGG GCACCGCCAT
ATCGCTTTTC TTGGCGAGCA TCATCCGCAA TCGTTTATCG CCCAGCGCCG TGCCGGTTAT
CTGGCGGCGT TGGCGGCCGG CGGCATTGCC CGGCGCGACG AGCTGTTGCG TCAGGTGGCG
CCATCACGTC GGGAGGGGTA TCTGGCGACC CGGCAATGGC TGGCTTTGCC GCAGCCGCCT
ACCGCCATCG TCATCGACGG CAGCACGCAG GGAGAAGGGG CGGCGCTGGC ATTACGCGAC
AGCGGTCGCC TGCACGGCAA GCAGGCGGTA TCGCTGATCG TCTATGACGG CCTGCCTGCC
GACTCGCTAC TAGAGATACC GGCCACCGCC ATTACACAGG CTACACGCTT AGAAGTGGGG
CAGCAGATCG CCCATATGGT GTTCCGTTTG CTGGCAGGCG ATGCGCCGTC GTCGTTGCAG
GTGCTGTGGC AACCGCAACT GCGCGCCGGA CAGACGGATA ACCCGCCGCC GCAAGCAGAA
TAA
|
|---|
| Protein sequence | MSLKQIAKTL GLSVTTVSRA LNGYDDVAAE TRQRVEDEAR RLGYRPNTFA RRLKMGRIDA
VGLVFPLQPA PLSNTTFMEM VAEISHELAK QEIDLLLIAD EGQAGSHAFL RMIESRRVDA
LIVAHTLQQD PRLQYLQSIG FPFLALGRSD LPLPYAWFDF DNQAGAALAT RHLIALGHRH
IAFLGEHHPQ SFIAQRRAGY LAALAAGGIA RRDELLRQVA PSRREGYLAT RQWLALPQPP
TAIVIDGSTQ GEGAALALRD SGRLHGKQAV SLIVYDGLPA DSLLEIPATA ITQATRLEVG
QQIAHMVFRL LAGDAPSSLQ VLWQPQLRAG QTDNPPPQAE
|
|---|
| |