| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2619 |
|---|
| Symbol | |
|---|
| ID | 8118027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 2970512 |
|---|
| End bp | 2972050 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644852998 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_003004931 |
|---|
| Protein GI | 251790210 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.181451 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGAA CGTTGTTCGT TGCCGGTTTG ATGACGCTGA TGCCCATCGC GCAGGCGGCG
GATTTGACGA TTGGACTGGC GTCATCCACT ACCTCAATGG ACCCGCAGTT CTATGTCGGC
GGCGCTAACA GCGCCATGGC CCGCAATCTG TTTGACGGGC TGGTTAACCA AAACGAAAAA
CAACAGGTTA CGCCTGCTCT GGCGGTGTCG TGGCAAGCCA TTGACGACAC GACCTGGCAG
TTTAGATTGC GACCGAACGT CAAGTTTCAT GACGGCACCG ATTTTAGCGC CCGGGATGTG
GTGGCCAGTG TGAAACGCGT CGCGTTGGCG GCGAAAAATA GCCCCAGCGC TTACACGCCC
TACGTAGCGG ATATCAGCGA GATTCGTGAA ATCGACCCGC TGACGGTGGA AATCAAGACC
AAAGGGCCGG CGGCGCTGCT GCTCAATAAC CTGAGTCGCA TCGCCATACT GCCGGCGCGG
CTGGCCGACC AGCCGAGCGA CGTGCTGAAC GGCGGCAAAG ACGTGATTGG CACCGGCCCG
TTCAAATTTG TCTCCTATAC CCCGGATGAC AAGGTGGTGT TGAGCCGCAA TGAGCATTAC
TGGGGCGGCA AGGCCGAGTG GGACACGGTG ACGTTGCGCG TCATCAAGAA CAGTAGCGCC
CGCATTGCCG CGTTGCTCTC CGGCGATGTG GACATGATCG AAAGCGTGCC GACGGCGGAC
CGCGCCACTA TCGCCCGGCA ACAGGCTTTC GTGACCGAAT CGGTGCCGGG TAACCGTATT
TTGTATCTGC ACCCGGATCA GGACCGGGAC GCGTCGCCGT TTGCCAAAGG CGATGACGGT
AAAAACCCGC TGAGGAAAGC GGCGGTGCGT CAGGCGATGT CGTTGGCAAT CAACCGCGAC
GCGCTGGTGC AACGTATCCT CGACGGTCAA GGGCTGCCTT CGTCGCAACT GGTGCCGCAG
GGGTATCCGG GGTATTCCGC CAACATACCG GCGCCGGTTT ACGACCTGAC GCAGGCAAAA
CAGAAACTGG CGGCGGCAGG CTACCCGAAC GGGTTTACCC TGACGTTCCA CGCCTCGAAC
GATCGCTACC CCAACGACGC CAAAATCGCA CAGGCGCTGG GGCAGATGTT CAGCCAGGCG
GGCATCAAGA CCGAGGTGGT CACCATGCCC GGCAACGTCT ACTTCGCCAA GGCGGCGCAG
CGTGAATTCA GCCTGGTGAT GGGCGGCGCG GCGATTGAAA CCGGCGAGGC ATCCGGCGTG
CTGGGGCCGT TGCTGGAAAC CTTTGGACCG AATACCGGTC AGGGAAACCG GGGACGGTAT
TCGAATGCCG AATTTGACAA GCTACTGAAT CAGGCTCGCG CCACGCTGAA TGAACAGCAA
CGCGATGCCC TGTTGCAGCA GGCAACCGAA TTGGCGATGA AGGAGCAAGG GGTCATCCCG
TTGCTGTTTC TCTCCAATAC CTGGGCAATG AAAAAAGGCT ATAGCTACGT AGGCCGCACA
GACGGCTACA CATTGCCCTA TTTCGTTCAT AAGCAGTAA
|
|---|
| Protein sequence | MKGTLFVAGL MTLMPIAQAA DLTIGLASST TSMDPQFYVG GANSAMARNL FDGLVNQNEK
QQVTPALAVS WQAIDDTTWQ FRLRPNVKFH DGTDFSARDV VASVKRVALA AKNSPSAYTP
YVADISEIRE IDPLTVEIKT KGPAALLLNN LSRIAILPAR LADQPSDVLN GGKDVIGTGP
FKFVSYTPDD KVVLSRNEHY WGGKAEWDTV TLRVIKNSSA RIAALLSGDV DMIESVPTAD
RATIARQQAF VTESVPGNRI LYLHPDQDRD ASPFAKGDDG KNPLRKAAVR QAMSLAINRD
ALVQRILDGQ GLPSSQLVPQ GYPGYSANIP APVYDLTQAK QKLAAAGYPN GFTLTFHASN
DRYPNDAKIA QALGQMFSQA GIKTEVVTMP GNVYFAKAAQ REFSLVMGGA AIETGEASGV
LGPLLETFGP NTGQGNRGRY SNAEFDKLLN QARATLNEQQ RDALLQQATE LAMKEQGVIP
LLFLSNTWAM KKGYSYVGRT DGYTLPYFVH KQ
|
|---|
| |