| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2605 |
|---|
| Symbol | |
|---|
| ID | 8118013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 2955319 |
|---|
| End bp | 2956227 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644852984 |
|---|
| Product | malonate decarboxylase, epsilon subunit |
|---|
| Protein accession | YP_003004917 |
|---|
| Protein GI | 251790196 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | [TIGR03131] malonate decarboxylase, epsilon subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.883707 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTC TGTTTACCTT CCCCGGACAG GGCGCGCAGC AGGCCGGCAT GTTGCAGCAA
TTGCCGGCCG ATACGAGCGT GCTGGATGAG GCGGTTGCCG TGTTGGGGGA TGAGGTTTAT
CAACTGGATA CCCCGCAGGC GTTGCGGCAT ACCCGTGCGG TACAGCTGTG CCTGCTGATA
ACAGGGGTAG CCTGGGCCCG GGCGCTGATG GCGCGTGGCT TGATGCCGGA GATGGTCAGC
GGCTTGTCGA TTGGCGCGTT TCCGGCGGCG GTGGTCGCCG GGGTACTGCG CTTTGACGAT
GCATTGCGGC TGGTGGCGTT GCGTGGCGAT CTGATGGAAC AGGCTTACCC GCAAGGGTAT
GGACTGACCG CGATTATGGG CTTAAGCCAG TCGGAGGTGG AAACGCTGTT GGTCGGTAGC
GGCGCCTATA TTGCCAACCT GAACGCTGAA CGGCAGATAG TGATTGCCGG CAGCGATGAA
AACATGGCGC AGGTGGCGGA GCGCGCGCTG CAACGCGGCG CCAGCCGGGC ACAGCGTTTG
CAGGTCAGTG TGCCGTCGCA TTGTGCGTTG CTGGATGCGC CCGCCAGACA ACTGGCGGCG
GCGATGGCGT CGGTTTCTTT TTCGCCGCCT CAGTGCGGCT ACCTGAGCGG CAGTTCCGCC
CGCGCCATCT GGCAGGCGGA ACGCATCGCA GACGATCTGG CGCTGAACAT GGCGCGCACC
GTACGCTGGC ATGAGGCGAT GGTGGCGGCG GAAGAGCGCG ATGTCGGGCT GGCGATAGAA
ATGCCGCCGG GCGGCGTGCT GACCTGCCTG GCGAAACAGG CGTTTAGCCG CAGCGAGGCG
TTTTCACTGG CGCGTAGCGG CGTCGAGGTG GTGGTACACC GGGCGGCCCA ACTCAAGGCG
CAGGGGTAA
|
|---|
| Protein sequence | MKILFTFPGQ GAQQAGMLQQ LPADTSVLDE AVAVLGDEVY QLDTPQALRH TRAVQLCLLI
TGVAWARALM ARGLMPEMVS GLSIGAFPAA VVAGVLRFDD ALRLVALRGD LMEQAYPQGY
GLTAIMGLSQ SEVETLLVGS GAYIANLNAE RQIVIAGSDE NMAQVAERAL QRGASRAQRL
QVSVPSHCAL LDAPARQLAA AMASVSFSPP QCGYLSGSSA RAIWQAERIA DDLALNMART
VRWHEAMVAA EERDVGLAIE MPPGGVLTCL AKQAFSRSEA FSLARSGVEV VVHRAAQLKA
QG
|
|---|
| |