| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2585 |
|---|
| Symbol | |
|---|
| ID | 8117993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 2936415 |
|---|
| End bp | 2937149 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644852964 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003004897 |
|---|
| Protein GI | 251790176 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCGA TGATTTTGTT TAATCAGGTT AACAAATGGT ATGGAGACTA CCATGCGCTG
ACTGACCTCA GCGCCGAAGT TAACATGGGG GAAGTCGTGG TGGTTTGCGG CCCATCCGGC
TCAGGTAAGT CCACACTGAT TCGTACGGTC AACCGCCTTG AGCCGATTGA GCAAGGGCAG
ATTCTGTTTG ATGGCATGGA TATTCACGGC AGCAGTACGC GATTGAATCA GTTACGCACT
CGGATTGGGT TTGTTTTCCA GAACTTCAAT CTATTCCCGC ATGTATCGGT GATGGACAAC
ATCATGATGT CGCCAGTGAA AGTGCTGGGG ATCAAGCGTT CCGAAGCACG TAAACATGCC
GGTGAATTGC TGGAGCGTGT CGGATTGTCG CACAAAGCCA ACGCCTATCC GGCACAGCTT
TCAGGCGGCC AGCAACAGCG AGTCGCTATT GCTCGTGCGT TGGCGATGAA GCCGCCGGTC
ATGTTGTTTG ATGAGCCCAC ATCGGCGCTG GATCCTGAAA TGGTGGGAGA GGTGTTAAAC
GTGATGCGTT CGCTGGCACA GGAGGGTATG ACCATGATGT GTGTGACGCA TGAGATGCAT
TTTGCCCGCG ATGTGGCCGA TACCATCTGG TTCATGGATC AGGGGGAAAT TCTCGAAAAG
GCCAAGCCGG AACAGTTCTT TAGCGCACCG CAGCACCCTC GCGCACAGCG TTTCCTGAGT
GATTTATTAA ATTGA
|
|---|
| Protein sequence | MIPMILFNQV NKWYGDYHAL TDLSAEVNMG EVVVVCGPSG SGKSTLIRTV NRLEPIEQGQ
ILFDGMDIHG SSTRLNQLRT RIGFVFQNFN LFPHVSVMDN IMMSPVKVLG IKRSEARKHA
GELLERVGLS HKANAYPAQL SGGQQQRVAI ARALAMKPPV MLFDEPTSAL DPEMVGEVLN
VMRSLAQEGM TMMCVTHEMH FARDVADTIW FMDQGEILEK AKPEQFFSAP QHPRAQRFLS
DLLN
|
|---|
| |