| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2568 |
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| Symbol | |
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| ID | 8120423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 2925892 |
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| End bp | 2928687 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644852951 |
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| Product | YD repeat protein |
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| Protein accession | YP_003004884 |
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| Protein GI | 251790163 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACAC TGAGGGCGTA CGACGCGGCC CACCGGCTGA CCCGCTGGCA CGATAACGAC
CAGACCTGGG CGCGCTACGA ATACGACGCA CAGGGGCGCT GCGTCTACAC CACCTGCGCC
GACGGCTTTC TGACTGCCCG CTTCGACTAC CACCCCGACC GGGTGGTGAT GACCGATGGC
CTCGGCCAGC GCAGCGAATT CGGTTTTAAC GATCTGCACC TGATGAGCTG GGAAACCTCC
CCGCTCGGTC ATGTCACCCG CTACGACTAC GACGACTACG GCAACCTGCT GCGGGAAATC
TCGCCCGCCG GTCGGGTGGT CGAATTCACC TATCTGGACG ATACCGGGCG GGTCAGCACC
TTTACCGACG CCAGCGGCCA CCAGTGGCAG TACGACTACG ACGACGCGCT GCGGCTGTGC
GGCGTCACCG ACCCGCTGGG ACGCGAGTGG AGCTGGGTGT ATGACGCCGA GGGTAACCCA
GAACGGCTCA CCGGCCCGGA CGCCAGCGAG GTACGATTCA CCTGGAACCG CTACGGCCTG
CTGACCCAGG TCAGCGACGC CGCCGGTGAG GTACAGGCGC GGTTGCAGTA CGACCACCGC
CAGCGGCTGC TGAGCGCCAC CGACGCCGAG AGCCGCACCC GGCAGTTACG CTACGACGGG
CAGGACCGGG TGGTGCAGTG GCAACGGGCG GACGGTGCCC GTTTCCGGCT CGGCTACCGC
CGGGCCAGCT GGACGCTGCC GGAGCAGCTG ATACGCCCGG ATGATAAGGA AGAGCAGCGC
CAGTACGACC GCCATAACAA CCTGCTGAGC TACGTGGACG GCAACGGCGC GCTGTGGCGC
CAGACCTTCG GCCCGTTCGA CCTGCTGACC GCGCGCACCG ACGCCGAAGG CCGCACCTGG
CACTACGCGT ACGACAGGGA AAGCCAGCAA CTGACAACGG TTATTGCCCC GGACGGCAGC
CGCTGGCAGT GGTGGCTGGA TGCCGACGGG CGGGTCATCC GCGAGCGTGA CATGACCGGC
ACCGAGACGC ATTACGGCTA CGACGAGGAC GGCCTGTGCA TCAGCGTGCG CAACGGCGAA
GGCGACACCC GCCACTTCCT CTACGACGCC CGCGGCCTGC TGTTGCGTGA AACCGCGCCG
GACGACACCC TGCACTACCG CTATGATGCG GTGGGCCGCC TGACCGAGGT CTCGTCAGCC
ACCGCCCATG TGCAACTGGA CTACGACCTG CGCGACCGGG TGGTGCGTGA ATGGCACAAC
GGCACGCTGC TCACCCGCCA GTACGATGAC GCGGCCCGCA CCGTCACCCG CACCCTGACC
TGGGACGGCG ACGCCGGGGA CACCACCGGC ACCCTCGCGC CGCTCACCAG TCTGTTCCAT
TACACCCGCA CCGGCGAGCT GCGGCAGGTG CAGTTGCCGG ACGGTGCCGA CCTGACCCTG
ACCCATGACG CGGCGGGCCG CGAGTCACAC CGTCGCGGCG GCAGCGGGTT TGTGCAGCAG
CGGGAATACG ACGTGATGGG CTGGCTGACG CGGGAGCAGA GCGGCGCGCA GCAGGACGGC
CGCCTGCTGG CGGCCCAGAC GCGGGAATAC CGCTACGACG GCGCCGGCAA CCTGACCGGG
GTGCGCCACA ACCGCGACGC CGAAGGCTAC CGGCTGGATG CCACCGGCCG GGTGCAGGCA
GTGCTGAGCG GCGGGGCGGG CAAACCGGTG GACACCACCG CCCGCTACCA CTACACCCGT
ACCGGTCTGC CGCAGGAGGC CGGCCGTCTC ACCGAGTGGC AGTCTGGCAG ACTGGTTCAG
CACGATGACA CCCATTACCA GTACGACAAG GCCGGACGGC TTATCCGTAA ACAGGTGGTG
CAGCCGGGCT ACCGCCCGCA GGTGTGGCAG TACCGCTGGG ACAGCCGCAA CCAGCTGCGG
GTGGTGGATA CCCCGACCGG CGAACGCTGG CTGTACCGTT ACGACCCGTT CGGCCGCCGG
GTGGGCAAAC GCTGCGACCA GAAAGCCGAA GAAATTCGCT ACCAGTGGGA CGGCGACCAG
ATAGCGGAAA TCCGCCACTA CCACCACGGC CAGCTCGTGG CCCGTCGTCA CTGGGTGTAC
AACGGCTGGG AACTGGTGGT ACAGCAGCGC CAGCACACCG GTGGCGACTG GGAAACGGAT
TTTGTGACCA GCAGCCAGAA CGGTACCCCA CAGGCGCTGT TCACACCGGA CGGCACCCTG
CGCTGGCTGG CACCGAAAGC CACGCTGTGG GGCCAGCGAC AGGCAGAAAA ATCGGAAAGT
CCGGACCCCG GCCTGGCCTT CGCCGGGCAG CTCCGTGACA GCGAAAGCGG GCTGTGCTAT
AACCGCTTTC GGTACTACGA CCCGGCCGGT GGGTGTTATG TCTCGCCAGA CCCGATAGGG
ATAGCGGGGG GTGAAAACCT GTATGCGTAT GTCAAAAACC CGGTAAGTTG GATCGACCCT
CTTGGTTTAA CGGGATGTAG CATCACCCGC GGTTCTGATT TAACACCTGA GATCGTTCAG
AATGCTTTGA AAGGCGACCC CATGCAGACA GTGCAAGGAA CAGTTTCACT CCCCGCAGTC
CAACGCTATG TTGATCGATT ACTAAAAGGT GATATAGCTC CCCCCATAAA AGTAGATGGC
AACGTAATCG TTGAAGGAAA TCATCGTTAT GTTGCAGGAA AGATAGTGGG CATACTTCCT
GAACAAGTCC CGGGAACCCT TTCTCCGAGT AACATACCAA GAGTTAAACC TATGTCTGAA
ACCGTAGCTG ACCTTTTCGA CTGGGGGAAT CACTAA
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| Protein sequence | MLTLRAYDAA HRLTRWHDND QTWARYEYDA QGRCVYTTCA DGFLTARFDY HPDRVVMTDG
LGQRSEFGFN DLHLMSWETS PLGHVTRYDY DDYGNLLREI SPAGRVVEFT YLDDTGRVST
FTDASGHQWQ YDYDDALRLC GVTDPLGREW SWVYDAEGNP ERLTGPDASE VRFTWNRYGL
LTQVSDAAGE VQARLQYDHR QRLLSATDAE SRTRQLRYDG QDRVVQWQRA DGARFRLGYR
RASWTLPEQL IRPDDKEEQR QYDRHNNLLS YVDGNGALWR QTFGPFDLLT ARTDAEGRTW
HYAYDRESQQ LTTVIAPDGS RWQWWLDADG RVIRERDMTG TETHYGYDED GLCISVRNGE
GDTRHFLYDA RGLLLRETAP DDTLHYRYDA VGRLTEVSSA TAHVQLDYDL RDRVVREWHN
GTLLTRQYDD AARTVTRTLT WDGDAGDTTG TLAPLTSLFH YTRTGELRQV QLPDGADLTL
THDAAGRESH RRGGSGFVQQ REYDVMGWLT REQSGAQQDG RLLAAQTREY RYDGAGNLTG
VRHNRDAEGY RLDATGRVQA VLSGGAGKPV DTTARYHYTR TGLPQEAGRL TEWQSGRLVQ
HDDTHYQYDK AGRLIRKQVV QPGYRPQVWQ YRWDSRNQLR VVDTPTGERW LYRYDPFGRR
VGKRCDQKAE EIRYQWDGDQ IAEIRHYHHG QLVARRHWVY NGWELVVQQR QHTGGDWETD
FVTSSQNGTP QALFTPDGTL RWLAPKATLW GQRQAEKSES PDPGLAFAGQ LRDSESGLCY
NRFRYYDPAG GCYVSPDPIG IAGGENLYAY VKNPVSWIDP LGLTGCSITR GSDLTPEIVQ
NALKGDPMQT VQGTVSLPAV QRYVDRLLKG DIAPPIKVDG NVIVEGNHRY VAGKIVGILP
EQVPGTLSPS NIPRVKPMSE TVADLFDWGN H
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