Gene Dd1591_2541 details

Gene Information

• Locus tag: Dd1591_2541
• ID: 8120394
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya zeae Ech1591
• Kingdom: Bacteria
• Replicon accession: NC_012912
• Strand: +
• Start bp: 2897679
• End bp: 2899655
• Gene Length: 1977 bp
• Protein Length: 658 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 644852925
• Product: glycoside hydrolase family 3 domain protein
• Protein accession: YP_003004860
• Protein GI: 251790139
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1472] Beta-glucosidase-related glycosidases

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATCAC GCTTCTCGCC GCACGTCGCG GCGGCTCTGC CCTGGGTTGC CACGTTGCCC 
CTGCTGTTTT CCCCACTGGC GGAGGCGGTA CAACAAGCCA CGCTCGATAC CCGCGGAGCC 
CCGTTGATTA CCGTCAACGG TCTGACATTT AAAGATTTGA ACCGTGACGG AAAACTCAAT 
CCGTATGAAG ACTGGCGCCT GCCGGCGGCA CAACGGGCGG CGGACCTGGT ATCACGTATG 
ACGCTGGCGG AAAAAGCCGG GGTAATGATG CACGGCTCCG CGCCGACCGC CGGCAGCGTT 
ACCGGCGCCG GTACGCAGTA TGACCTCAAC GCGGCAAAAA CCATGATTGC CGAGCGCTAC 
GTCAACAGCT TTATTACCCG GCTTTCCGGC GATAATCCGG CACAAATGGC TGAGGAAAAC 
AATAAATTGC AGCAACTGGC GGAAGCCACC CGATTAGGGA TTCCCGCCAC CATCAGTACC 
GACCCTCGCA GTTCGTTCCA GTCGCTGGTC GGCGTCAGCG TATCGGTCGG TAAATTCAGC 
AAATGGCCGG AAACCCTTGG CCTGGCCGCT ATCGGTGACG AAGAACGGGT GCGGCGCTTT 
GCCGATATTG TGCGTCAAGA ATACCGCGCC GTCGGCATCA CCGAAGCATT GTCGCCCCAG 
GCCGACCTGT CCACCGAACC GCGCTGGCCG CGTATCGACG GCACTTTTGG CGAAGACCCT 
GACCTGACCA AAAAAATGGT ACGCGGTTAT GTCACCGGTA TGCAGAACGG CAGCAACGGC 
CTCAACGCGC AGAGCGTGAT CTCCATCGTG AAACACTGGG TCGGCTACGG CGCCGCTCAG 
GAGGGCTGGG ACAGCCATAA CGTCTACGGC AAATACGCAC AGTTCCGGCA AAATAACCTG 
CAATGGCACA TTGACCCATT CACCGGCGCG TTTGAGGCCC ACGCCGCCGG CATCATGCCC 
ACCTACTCGA TTTTGCGAAA CGCCCGCTGG CACGGTAAAC CGATCGAACA GGTCGCCGCC 
GGGTTCAACC GCTTCCTGCT GACAGACCTG TTACGCGGCC AATACGGTTT CGATGGCGTG 
ATCCTCAGCG ACTGGTTAAT CACTAACGAC TGCAAAGGCG ACTGCATCAC CGGCGTGAAG 
CCGGGCGAAA AACCGATCCC TCGCGGTATG CCCTGGGGTG TGGAGAACCT GACGCCCGCC 
GAGCGCTTCA TCAAAGCCGT CGATGCCGGG GTCGATCAGT TCGGCGGCGT CACCGACTCG 
GCCTTGCTGG TGCAAGCCGT GCAAGACGGC AGGCTGAGCG AAGCCCGGTT GGATGCCTCC 
GTCAACCGTA TACTGAAGCA GAAATTCCAG ATTGGATTAT TCGAACGTCC CTACGTTAAC 
GCCGCGCAGG CCAGCGACAT CGTCGGCAAA GCGGACTGGC AACAGTTGGC GGACGACACC 
CAGGCCCGCT CGCTGGTGTT GTTGCAAAAC AACAATCTGC TGCCGCTGCG TAAAGGTAGC 
CGGGTCTGGC TGCACGGTAT TGCCGCCACC GCCGCACAGG CTGCCGGTTT TGTCGTCGTC 
GATACGCCGG AACAGGCCGA TGTAGCGCTG ATCCGTACCC AGACACCGTA TGAACAACCA 
CACAAAAACT TTTTCTTCGG CAGCCGTCAC CACGAAGGAT CACTGGCGTT TCGTGCTGAC 
AACCCGGACT ATCAAGCCAT TGTGCGCGCC AGCGCCCGCG TACCGACGCT GGTTAGCCTC 
TATATGGAAC GCCCGGCCAT CCTGACCAAT GTGGTGGACA AGACCCGTGC GCTGGTCGCC 
AACTTCGGCG TCAGCGATAG CGTTTTACTT GACCGGCTGA CGTCTGGCGC GGCCTACACC 
GCTAAATTGC CTTTTGAGCT GCCGTCCTCC ATGCAGGCGG TGCGCAAGCA ACAGCCTGAC 
CTGCCTTACG ACAGCGCCAA ACCGTTATTC CCCTTTGGCT ACGGCCTGCC TCACTAA 

 

Protein sequence

MKSRFSPHVA AALPWVATLP LLFSPLAEAV QQATLDTRGA PLITVNGLTF KDLNRDGKLN 
PYEDWRLPAA QRAADLVSRM TLAEKAGVMM HGSAPTAGSV TGAGTQYDLN AAKTMIAERY 
VNSFITRLSG DNPAQMAEEN NKLQQLAEAT RLGIPATIST DPRSSFQSLV GVSVSVGKFS 
KWPETLGLAA IGDEERVRRF ADIVRQEYRA VGITEALSPQ ADLSTEPRWP RIDGTFGEDP 
DLTKKMVRGY VTGMQNGSNG LNAQSVISIV KHWVGYGAAQ EGWDSHNVYG KYAQFRQNNL 
QWHIDPFTGA FEAHAAGIMP TYSILRNARW HGKPIEQVAA GFNRFLLTDL LRGQYGFDGV 
ILSDWLITND CKGDCITGVK PGEKPIPRGM PWGVENLTPA ERFIKAVDAG VDQFGGVTDS 
ALLVQAVQDG RLSEARLDAS VNRILKQKFQ IGLFERPYVN AAQASDIVGK ADWQQLADDT 
QARSLVLLQN NNLLPLRKGS RVWLHGIAAT AAQAAGFVVV DTPEQADVAL IRTQTPYEQP 
HKNFFFGSRH HEGSLAFRAD NPDYQAIVRA SARVPTLVSL YMERPAILTN VVDKTRALVA 
NFGVSDSVLL DRLTSGAAYT AKLPFELPSS MQAVRKQQPD LPYDSAKPLF PFGYGLPH