Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_2519 |
Symbol | |
ID | 8120372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 2877780 |
End bp | 2878814 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644852903 |
Product | ABC transporter related |
Protein accession | YP_003004838 |
Protein GI | 251790117 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00672274 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACGC TTGAACTTTA TGGCATCGGC AAATCTTTTA ACGCCGTTAA GGTGCTGGAC GGCATCGACT TGCAGGTGGC GCCGGGCAGC CGTACCGCCA TTGTCGGCCC CTCCGGTTCC GGTAAAACCA CGTTGTTGCG TATCATCGCC GGCTTTGAAG CGCCGGATTG CGGCACGGTG CGTCTGCAAA CGCGCGTCGT GGCGGATGCG ACCCAGTGGG TGCCGGCCCA CCAGCGCGGT ATCGGCTTTG TGCCGCAGGA CGGCGCGCTG TTTCCGCACT TTACCGTGGC GCAGAACATC GGTTTTGGGC TTGATGGCAG TAAGCAAGAT AAACAGCGAC GCATTGATGA ATTGATGGCG ATGGTATCGC TCGATTCGCG GCTGGCGGCG CTGTGGCCGC ATGAGTTGTC CGGCGGCCAG CAACAGCGGG TGGCGCTGGC GCGTGCGTTG TCTCAGCGCC CGGCGTTGAT GCTGCTGGAT GAACCGTTTT CCGCGCTGGA TACCGGCCTG CGCGCCGCTA CCCGTCAGGC GGTATCCTCG CTGTTGGCGG AGGCGGGCGT CGCATCGATT CTGGTGACCC ACGATCAGGC CGAAGCGCTG TCGTTTGCCG ATCAGGTCGC GGTAATGCGG CAGGGGCGGC TGGTGCAAGT GGGGTCGCCG CAGTCGCTGT ATTTGCGCCC GGTGGATGAA GGAACCGCCG CGTTTCTCGG CGATACGCTG GTGCTGTCGG CACAACTGAA AGGCGGCCGC GCCGCGTGCG CGCTGGGCAA CATCGCGGTT GACGATAATC AATCTGCCGA TGCGGCGCGG ATCATGCTGC GACCGGAGCA GATTCAGGTC ACGTTGGCCG AGCCGTCGGC AACAGCGCAG GCGGTGGTGG CGAATATTGA GTTTGCCGGC TTCGTGTCCA CACTGCGCTT GCGGATGGCG AACAGCCAGC AGGTGATCGA ACTAAAAAGC GTCAGCCGGG AAGATATCGT CGTGGGTTGC GGCGTCAATC TGTCGGTCGT GGGGCAAGCG CATCGGCTGG ACTGA
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Protein sequence | MNTLELYGIG KSFNAVKVLD GIDLQVAPGS RTAIVGPSGS GKTTLLRIIA GFEAPDCGTV RLQTRVVADA TQWVPAHQRG IGFVPQDGAL FPHFTVAQNI GFGLDGSKQD KQRRIDELMA MVSLDSRLAA LWPHELSGGQ QQRVALARAL SQRPALMLLD EPFSALDTGL RAATRQAVSS LLAEAGVASI LVTHDQAEAL SFADQVAVMR QGRLVQVGSP QSLYLRPVDE GTAAFLGDTL VLSAQLKGGR AACALGNIAV DDNQSADAAR IMLRPEQIQV TLAEPSATAQ AVVANIEFAG FVSTLRLRMA NSQQVIELKS VSREDIVVGC GVNLSVVGQA HRLD
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