Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_2513 |
Symbol | |
ID | 8120366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 2870803 |
End bp | 2871948 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644852897 |
Product | ABC-2 type transporter |
Protein accession | YP_003004832 |
Protein GI | 251790111 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.865231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGCGGT ACATTGACGA TCATCGTTTT TCCTGGCGAC GGCTGCGCGC CCTGTGTCTG AAGGAAACCC GGCAGATCCT GCGCGACCCC AGCAGCGCGT TGATCGCGTT TGTCATCCCG TTGTTGCTGC TGTTTATTTT CGGCTACGGC ATCAATCTTG ACTCCAGCCG CCTGAACATC GGCGTGCTGA TGGAGCAACA CAGCGCCGAG GCCGACAGTC TGGCGCGCGC CTTTACCGGA TCGCCGTATC TGGCCGTTAC CCTCAGCGAT AACCGCCCGG CGCTGATCGA ACAGATGCAA GCCGGGCAAA TTCGCGGGCT TCTCGTCATC CCGGTCGATT TCGCCACCCG GCTGGCACGC CCGCAGGATC GCGCGCCGAT TCAGGTGATC ACCGACGGCA GCGAACCCAA TACCGCGCAG TTCGTACAGG GGTACGCCCA AGGGGTGTGG CAGCTCTGGC AACAACAGTA CGCGCAGGAC CACGGCAGCC GTTATCAAGC GCTGATCGAA ATACAGACCC GCTACTGGTT CAACGCCGCC GCCATCAGCC GCCATTTCAT TATTCCCGGC GCCGTCACCA TCATCATGAC CGTGATCGGC GCCATCCTGA CCTCACTGGT GATCGCCCGC GAGTGGGAAC GGGGCACCAT GGAGGCACTG CTATCGACGC AGGTCACCCG CACCGAACTG CTGCTCACCA AATTGCTCCC TTATTATGTG TTGGGGATGA TCGCCATGGT GCTATGCGTG GTAGTGGCGG TATTTGTGCT GGGGGTGCCG TATCGCGGCT CGCTATGGGT GCTGTTCGGC ATGAGCAGCC TGTTTCTCGC CAGCACGCTG GGCGTGGGGT TACTGATTTC GACCCTGACC CGCAATCAGT TCAACGCGGC GATGGTGGCG CTCAACGCCG CGTTTCTGCC GGCGGTGATG CTGTCCGGGT TTATCTTTGA AATTCACAGT ATGCCGGTGT TGGTTCAGGC GGTGTCGTAC CTGATCCCCG CCCGCTATTT CGTCAGCACG CTGCAAACCC TGTTCCTGGC CGGGAACATC GGCGGCGTGT TGCTGATGAA CCTGTTGTTT CTGATGACGT CGGCGGTGTT TTTCATCGGC CTGACCGCCT GGAAAACCCG GCGTCGGCTC GATTAG
|
Protein sequence | MPRYIDDHRF SWRRLRALCL KETRQILRDP SSALIAFVIP LLLLFIFGYG INLDSSRLNI GVLMEQHSAE ADSLARAFTG SPYLAVTLSD NRPALIEQMQ AGQIRGLLVI PVDFATRLAR PQDRAPIQVI TDGSEPNTAQ FVQGYAQGVW QLWQQQYAQD HGSRYQALIE IQTRYWFNAA AISRHFIIPG AVTIIMTVIG AILTSLVIAR EWERGTMEAL LSTQVTRTEL LLTKLLPYYV LGMIAMVLCV VVAVFVLGVP YRGSLWVLFG MSSLFLASTL GVGLLISTLT RNQFNAAMVA LNAAFLPAVM LSGFIFEIHS MPVLVQAVSY LIPARYFVST LQTLFLAGNI GGVLLMNLLF LMTSAVFFIG LTAWKTRRRL D
|
| |