Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_2512 |
Symbol | |
ID | 8120365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 2869068 |
End bp | 2870819 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644852896 |
Product | ABC transporter related |
Protein accession | YP_003004831 |
Protein GI | 251790110 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.58848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCCATG ATACACCGCT GATCCGCTTC GATGCGCTGG AAAAACGCTT CGCCGGTCTG GAGAAGCCGG CGTTGGCAAA GCTGAGTGCC GAGATTCGCG CCGGTGCGGT TACCGGGCTG GTCGGGCCGG ACGGCGCCGG CAAAACCACG TTGATGCGAA TGCTGGCCGG GTTGCTGACG CCCAGCGCCG GCACCATTCG GGTGATGGGG CTCGACCCGA TAGCCGATGA CCGCCGGCTA CACGCCCGGC TGGGTTATAT GCCGCAGAAA TTCGGGCTGT ACGAAGACCT CACGGTAATG GAAAACCTGA CGCTGTACGC CGACCTGCGC GGCATTACCG GCGATACCCG GCGCGCCACC TTTGAGCGGC TATTGCAGTT TACCGACCTC ACCCGCTTCA CTACCCGGCT GGCGGGCAAA CTCTCCGGCG GCATGAAACA AAAGCTGGGG CTGGCCTGCA CTCTGCTGGG TCAACCCAGT GTACTGCTGC TGGATGAGCC GGGCGTCGGC GTCGACCCGA TATCACGCCG CGAGCTGTGG CGCATGGTGC ACGAATTGGC GGACGACGGC ATGTTGATAC TCTGGAGCAC CTCCTATCTG GACGAAGCGG AGCAGTGTCG CGACGTGCTG CTGCTCAACG AGGGGGAATT GCTCTATCGG GGAGCGCCCG CCGACCTGAC GCAACAGATG GCGGGTCGTT GTCTCTTGCT CGACCAGCCG GGCAGCAATC ATCGCCGCCT GCTGCAACAG GCGCTGCGTC AACCGCAGGT GAGCGACGGC GTCATTCAGG GGCGCTATGT GCGGTTGATC CTGAAACCGC AGGCGGACAG CAACGCACTG CTGCACACGC TCGGCCTGCC GCCGGACAGC GTGCAAAATA CCGCGCCGCG TTTTGAAGAT GCGTTCATCG ACCTGCTGGG CGGCGGCCCC GGCGCGACCT CGTCGTTGGC GGCTATCCTG CCGCAATTGG ACACACAGCG TGGGGAAACG GTGATCGAAG CCCGCAATCT GACGAAAAAA TTCGGCGATT TCGCTGCCAC CGACCAGGTG AATTTTCAGG TGCGTCGCGG TGAAATCTTC GGTCTGCTGG GGCCGAACGG CGCCGGCAAA TCCACCACCT TTCGTATGAT GTGCGGCCTG CTGACACCCA CCGACGGTCA GGCGCTGGTG CTGGATATGG ATCTCAAGAC CCGCTCCGGG CGTGCGCGCC AGCATTTGGG GTATATGGCG CAGAAGTTTT CGCTGTACGG CAACCTGACC GTGGAACAGA ACCTGCGCTT TTTTTCCGGT GTTTACGGCC TGCGCGGTCA GCGCCAGCAG GATAAAGTGA ACAGCATGGC GCAGGCGTTC AACCTCCACC CTATTTTCCA GCAAACGCCG GATGCGCTGC CGCTGGGGTT TCGCCAGCGT CTGGCGCTGG CCTGTGCGCT GATGCACGAA CCGGACATCC TGTTTCTTGA CGAACCCACC TCCGGCGTCG ATCCGTTTAC CCGTCGCGAG TTCTGGCAGC ACATTAACGG CATGGTGGAC AAAGGGGTAA CAATTATGGT CACCACCCAT TTTATGGACG AAGCCGAATA CTGCGACCGT ATCGGATTGG TGTATCGCGG GCGGCTCATC GCCAGCGGCA CGCCGGACAA TCTCAAGCGG CAGGCGGCTT GCGACGACAT GCCGGACCCG ACCATGGAAC AGGCGTTTAT TGCTCTGGTA CAGGCGTATG ACCAGGAGGC GACGGATGCC GCGGTACATT GA
|
Protein sequence | MTHDTPLIRF DALEKRFAGL EKPALAKLSA EIRAGAVTGL VGPDGAGKTT LMRMLAGLLT PSAGTIRVMG LDPIADDRRL HARLGYMPQK FGLYEDLTVM ENLTLYADLR GITGDTRRAT FERLLQFTDL TRFTTRLAGK LSGGMKQKLG LACTLLGQPS VLLLDEPGVG VDPISRRELW RMVHELADDG MLILWSTSYL DEAEQCRDVL LLNEGELLYR GAPADLTQQM AGRCLLLDQP GSNHRRLLQQ ALRQPQVSDG VIQGRYVRLI LKPQADSNAL LHTLGLPPDS VQNTAPRFED AFIDLLGGGP GATSSLAAIL PQLDTQRGET VIEARNLTKK FGDFAATDQV NFQVRRGEIF GLLGPNGAGK STTFRMMCGL LTPTDGQALV LDMDLKTRSG RARQHLGYMA QKFSLYGNLT VEQNLRFFSG VYGLRGQRQQ DKVNSMAQAF NLHPIFQQTP DALPLGFRQR LALACALMHE PDILFLDEPT SGVDPFTRRE FWQHINGMVD KGVTIMVTTH FMDEAEYCDR IGLVYRGRLI ASGTPDNLKR QAACDDMPDP TMEQAFIALV QAYDQEATDA AVH
|
| |