Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_2505 |
Symbol | |
ID | 8120358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 2859838 |
End bp | 2861433 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644852889 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_003004824 |
Protein GI | 251790103 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACA GATTAGCGCG TATCGCGCTG GCCACGATGA CGCTGGCGTT GACGCAGACG GCCTACGCCA AAACGCTGGT GTACTGCTCG GAAGGGTCGC CGGAGAATTT TAATCCGCAA CTGTATACCT CCGGCACCAG CGTGGATGCC AGCGCCGTGC CGATTTACAA CCGACTGGTG GACTTCAAGG TCGGCACCAC CGAGCTGGTG CCGAGCCTGG CGGAACGTTG GGACATCAGC CCGGACGGTA CTCAATACAC CTTTCATCTG CGCAAGGGGG TGAAATTCCA TCGCAACGCC CAGTTTGCCC CGAGCCGCGA TTTCAACGCC GATGACGTGA TTTTCTCTTT TCAGCGCCAG CGCGATCCCA ATCACCCGTA TCACAAGGTA TCCGGCGGCA CTTATGCCAA TTTCGAGAGC CTGTCGTTTC GCAGCCTGAT TACCGCCATC GATAAACTGG ATGATTACAC GGTGCGCTTT ACCCTGAGCC ATGCACAAGC GCCGTTTCTG GCCGATTTGG CCTGGTATTT TGCGTCAATG TTGTCCGCCG AATACGCCGA CCAGATGCTG AAAGCCGGCA CGCCGGAGAA AGTGGATCTG GAGCCGGTCG GCACCGGCCC GTTCCAACTG GCGCAATACC AGAAAGATTC CCGCATTCTG TATCAGGCGT TTGCCGACTA CTGGCAGGGC AAAGCCAAAC TGGACCGGCT GGTGTTCAGC ATCACGCCGG ATGCCTCGGT GCGCTATGCA AAGCTGCGTA AAAATGAATG TCAGGTGATG CCGTTTCCCA ATCCGGCAGA GCTGGCGGAC ATGAAGAGCA ACAAGGACAT TACCCTGATG CAGAAAGCCG GCTTGAATAT CGGTTTTCTG GCCTTCAATA CCCGCAAAGC GCCGCTGGAT AACGTCAAGG TGCGTCAGGC GCTGACGATG GCGATCAACA AACCGGCGAT TATCGAGGCG GTGTTTCAGG GCACCGGCAG CGCGGCTAAA AATTTGCTGC CGCCCGGCGT ATGGAGCGCG GCAGCCGACC TGAAGGACTA TGAATACGAC CCGGAAAAAG CGCGGGTGCT GCTGAAAGAC GCCGGGCTGG CGGAAGGCAC CGCCATCGAT CTGTGGGCGA TGCCGGTTCA GCGGCCGTAT AACCCCAATG CGCGCCGCAT GGCGGAAATG ATTCAAGCCG ACTGGGCTAA AGTGGGAGTG AAAGCCAATA TCGTCAGTTA CGAGTGGGGC GAATACCTCA AGCGGGTGAA GAGCGGCGAA CATCAGGCGG CGCTGATGGG CTGGACTACC GCCACCGGCG ACCCGGATAA TTTCTTCGGC CCGCTGTTTA CCTGCAATTC CGCCAATGGC GGGTCCAACT CATCCCAATG GTGCTACCCG CCGTTCGATA AGCTAATCAC CGACGCACGC ACCGAGCAGG ATCACCAGAA ACGCGTGGAA TTGTATCGTC AGGCGCAGTT CATGATGCAT GAGCAGGCGC CGGCGGTGAT GATCGCGCAC TCGACTATTT TTGAGCCGGT GCGCAATACG GTGACCGGGT ATGAAATCGA CCCGTTCGGC AAACACATTT TTTATCAGGT CGATATTCGG CAGTAA
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Protein sequence | MKNRLARIAL ATMTLALTQT AYAKTLVYCS EGSPENFNPQ LYTSGTSVDA SAVPIYNRLV DFKVGTTELV PSLAERWDIS PDGTQYTFHL RKGVKFHRNA QFAPSRDFNA DDVIFSFQRQ RDPNHPYHKV SGGTYANFES LSFRSLITAI DKLDDYTVRF TLSHAQAPFL ADLAWYFASM LSAEYADQML KAGTPEKVDL EPVGTGPFQL AQYQKDSRIL YQAFADYWQG KAKLDRLVFS ITPDASVRYA KLRKNECQVM PFPNPAELAD MKSNKDITLM QKAGLNIGFL AFNTRKAPLD NVKVRQALTM AINKPAIIEA VFQGTGSAAK NLLPPGVWSA AADLKDYEYD PEKARVLLKD AGLAEGTAID LWAMPVQRPY NPNARRMAEM IQADWAKVGV KANIVSYEWG EYLKRVKSGE HQAALMGWTT ATGDPDNFFG PLFTCNSANG GSNSSQWCYP PFDKLITDAR TEQDHQKRVE LYRQAQFMMH EQAPAVMIAH STIFEPVRNT VTGYEIDPFG KHIFYQVDIR Q
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