| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2469 |
|---|
| Symbol | |
|---|
| ID | 8120110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 2818504 |
|---|
| End bp | 2819808 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644852853 |
|---|
| Product | putative pectinesterase |
|---|
| Protein accession | YP_003004788 |
|---|
| Protein GI | 251790067 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4677] Pectin methylesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.895258 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTCTGA CACACTATTC CGGGCTGGCC GCCGCGGTCT CTATGTCAAT TCTTCTGACC
GCCTGCGGCA GCCAGATGCC GAATCATTCG GCGCGTTTTC AGCCGGTTTT TCCCGGCACC
GCCAGTCGCC CGGTGCTGTC GGCACAGGAG GCCGAACGCT TCACACCACA ACACTATTTC
GCCCACGGCG GTAAATACGC CCGACCGATA ACGGATGGCT GGATGCCAAC CCCGATTGAA
ACCGCACATG TCGTCGCCGC TTATGTCGTC GGCCCGCGCG TGGGTGTAGC CGGCGTTACC
CACACCAGCA TTCAGCAAGC GGTGAATGCT GCGCTACGTC AGCATCCAGG CCAGACGCGA
GTATACATAA AACTGCTGCC AGGCACCTAT ACAGGTACGG TATACATCCC CGAGGGCGCG
CCGCCGCTGA CGTTATTCGG TGCCGGTGAC CGGCCGGAAC AGGTAGTCGT GTCGCTGGCG
CTGGATTCAA TGATGTCACC GGCCGACTAC CGCGCCCGCG TCAATCCGCA CGGTCAGTAT
CAGCCGACCG ATCCGGCCTG GTATATGTAC GATGTCTGCG CTTCAAAACC GGGCACAACC
ATCAATACCA CCTGTTCAGC CGTGATGTGG TCACAGAGCA ACGATTTTCA GTTGAAAAAC
CTGACGGTGG TGAATGCGCT GCTGGATACG GTGGACAGCG GTACGCATCA GGCGGTTGCG
CTACGTACCG ACGGCGACCG GGTGCAACTG GAAAACGTTC GCCTGCTCGG CCGTCAGGAC
ACCTTTTTCG TCAATACCAG CGATCGCCAA AACGGCTATG TCACCGATCA TTACAGCCGC
GCCTACATCA AAGACAGCTA CATTGAAGGG GATGTGGATT ATGTGTTCGG TCGCGCCACT
GCCGTGTTTG ACGGGGTGCG ATTCCATACC GTGTCCAGCC GTGGTTCAAA AGAAGCCTAT
GTGTTCGCAC CGGACAGTAT TCCGTCGGTG AAATACGGTT TTCTGGTGAT CAACAGCCGG
TTGACCGGCG ACAGCGGTTA TCGCGGCACG CAGAAAGCCA AACTGGGGCG CGCCTGGGAT
CAGGGTGCGA AACAGACGGG TTACCTGCCG GGGAAAACCG CCAACGGCCA GTTGGTGATC
CGCGACAGTA CCATTGACAG CAGCTACGAC CTCGTCAACC CGTGGGGGAC CGCCGCCACC
ACCGACCGGC CGTTCAAGGG CAATATCAAC CCGCAACGCC ATCTGGACGA CCTCCACTTC
AACCGGTTGT GGGAGTACAA CACCCAGGTG CTGCTGCACG AGTAA
|
|---|
| Protein sequence | MSLTHYSGLA AAVSMSILLT ACGSQMPNHS ARFQPVFPGT ASRPVLSAQE AERFTPQHYF
AHGGKYARPI TDGWMPTPIE TAHVVAAYVV GPRVGVAGVT HTSIQQAVNA ALRQHPGQTR
VYIKLLPGTY TGTVYIPEGA PPLTLFGAGD RPEQVVVSLA LDSMMSPADY RARVNPHGQY
QPTDPAWYMY DVCASKPGTT INTTCSAVMW SQSNDFQLKN LTVVNALLDT VDSGTHQAVA
LRTDGDRVQL ENVRLLGRQD TFFVNTSDRQ NGYVTDHYSR AYIKDSYIEG DVDYVFGRAT
AVFDGVRFHT VSSRGSKEAY VFAPDSIPSV KYGFLVINSR LTGDSGYRGT QKAKLGRAWD
QGAKQTGYLP GKTANGQLVI RDSTIDSSYD LVNPWGTAAT TDRPFKGNIN PQRHLDDLHF
NRLWEYNTQV LLHE
|
|---|
| |