Gene Dd1591_2440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2440 
Symbol 
ID8120080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2794328 
End bp2796103 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content58% 
IMG OID644852824 
Producttype III restriction protein res subunit 
Protein accessionYP_003004760 
Protein GI251790039 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTTA CACTGCGCCC GTACCAGCAA GAAGCGGTTG ACGCCACCCT TGCCTATTTT 
CGCCAGCACA CCGCCCCGGC GGTGATCGTT TTACCTACCG GCGCCGGCAA AAGCCTGGTA
ATTGCCGAAC TGGCGCGGCT GGCGCGCGGG CGGGTATTGG TACTGGCGCA CGTCAAAGAA
CTGGTTGAGC AGAATCACGC CAAATATTGC GCGCTGGGTT TACCGGCGGA TATTTTCGCC
GCCGGGCTCA ATCAGCACGA CAGCGAAGGC AAAGTGGTGT TTGGCAGTGT GCAGTCAGTG
GCGCGTCACC CCGGAAAATT CGATGAGGCG TTCTCACTGT TGATCATCGA TGAGTGTCAT
CGAATCAGCG ACGATGAAAA CAGCCAATAC CAGCAAATCA TCCGGCATTT ACAGCAGGCC
AATCCCCAGT TGCGGCTGCT GGGATTGACC GCCACCCCCT ATCGCCTTGG CCGGGGTTGG
ATCTATCAAT ACCATTATCA TGGCATGATC CGCGGCGACG AGAGCTGCCT GTTCCGCGAC
TGCATCTACG AATTGCCGCT GCGCTACATG ATCCGCCACG GTTTTCTGGT GCCGCCGGAG
CGACTCGACA TGCCGGTGGT GCAGTACGAC TTCAGCCAAC TGGTGGCGCG CAGCAACGGA
TTGTTCAATA ATGGATCGTT CAGCGATGCG GATCTGAACC GGGAGCTGAA GCGTCAACAA
CGCGTCACCC CGCACATCAT TCGCCAGATT ATCGAATACA CGACAAACCG GCGAGGCGTG
ATGATTTTCG CCGCCACGGT GGAACATGCG CGGGAAATCG AAGGATTGTT ACCGGTCGGC
GCAGCGGCGC TTATCAGCGG GGAAACGCCT ACCCCACAGC GAGACGCGCT CATCAGCGCC
TTCAAACAGC AGCAATTGCG TTATCTGGTT AACGTATCGG TATTGACGAC AGGCTTTGAT
GCGCCACATG TCGACGCCAT CGCCATTTTA CGCCCGACGG AATCCGTCAG CCTCTATCAG
CAAATCATCG GGCGTGGCTT GCGTTTGTTT CCCGGTAAAA CCGACTGCCT GATACTCGAC
TATGCCGGCA ACCCTTTCGA TCTCTACACG CCGGAAGTCG GCAACAGTAA ACCGCACAGC
GACAGTCAAC CCGTTCAGGT ATTCTGCCCG CAATGCGGCT TCGCCAACCT GTTCTGGGGG
AAATGCACCG ATGACGGCAG CGTGATCGAG CATTACGGCC GCCGCTGTCA GGGCTGGCAG
GACGATGAAC AAGGGCGGCG ACAACAATGC GACTACCGCT TCCGCTTCAA AAGCTGCCCG
CACTGCGGCG CGGAAAACGA CATTGCCGCA CGACGCTGCC AAACCTGCGA TGCATTGTTG
GTCGACCCGG ATGATATGCT GAAAGCCGCA TTAAAGCTCA AAGATGCGCT GGTACTGCGC
TGTAGCGGGA TGCAACTGCA ACCCGGCGCC GACGCCAAAG GCGAATGGCT GCGCATCACC
TATTACGACG AAGACGGCGC CGACGTCAGC GAACGCTTTC GCCTGCATAC ATCAGCCCAG
CGTAACGCGT TTAGCCATGT TTTTCTGCGG GTGCATCAGC GTGCGCCCGG CGTTCCTTTT
CACTGGCAGA ATGCTGACGA TGTGGTGACG CAGCAGGCGC TGCTGCGCGC GCCGGACTTC
GTCGTGGCCC GCTTACAGGG AAAATACTGG CAGGTGCGGG AAAAAATCTT CGATTATCAG
GGCCGCTATC GCCGGGCAAA CGAACTGCGC GGCTAG
 
Protein sequence
MSFTLRPYQQ EAVDATLAYF RQHTAPAVIV LPTGAGKSLV IAELARLARG RVLVLAHVKE 
LVEQNHAKYC ALGLPADIFA AGLNQHDSEG KVVFGSVQSV ARHPGKFDEA FSLLIIDECH
RISDDENSQY QQIIRHLQQA NPQLRLLGLT ATPYRLGRGW IYQYHYHGMI RGDESCLFRD
CIYELPLRYM IRHGFLVPPE RLDMPVVQYD FSQLVARSNG LFNNGSFSDA DLNRELKRQQ
RVTPHIIRQI IEYTTNRRGV MIFAATVEHA REIEGLLPVG AAALISGETP TPQRDALISA
FKQQQLRYLV NVSVLTTGFD APHVDAIAIL RPTESVSLYQ QIIGRGLRLF PGKTDCLILD
YAGNPFDLYT PEVGNSKPHS DSQPVQVFCP QCGFANLFWG KCTDDGSVIE HYGRRCQGWQ
DDEQGRRQQC DYRFRFKSCP HCGAENDIAA RRCQTCDALL VDPDDMLKAA LKLKDALVLR
CSGMQLQPGA DAKGEWLRIT YYDEDGADVS ERFRLHTSAQ RNAFSHVFLR VHQRAPGVPF
HWQNADDVVT QQALLRAPDF VVARLQGKYW QVREKIFDYQ GRYRRANELR G