Gene Dd1591_2437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2437 
Symbol 
ID8120077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2791842 
End bp2793023 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content55% 
IMG OID644852821 
Productbicyclomycin/multidrug efflux system 
Protein accessionYP_003004757 
Protein GI251790036 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.413789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCATCAC CCTCATCTTC GCGCGTCGGT CTGATTTTTA TCCTGGGATT AATATCGATG 
CTGATGCCTA TCGCCATCGA TATGTATTTG CCGGCGTTGC CGGTGATTGC CAAAGAGTTT
TCGGTCGATC CGGGCCGTGT GCAGATGACG CTCAGTTCAT ATGTGCTCGG TTTCGCTATT
GGTCAGATCT TTTACGGCCC GATGTCGGAC AGCATCGGGC GTAAGCCGGT GATTCTGGGC
GGGGTTCTGG TCTTTACGCT GGCGGCCGCA GCCTGTGCCT TGTCGCAAAC GGTCGACCAA
CTGATTCATA TGCGCTTTCT GCATGGCCTG TCGGCGGCTT CAGCCAGTGT GGTTATCAAT
GCGCTGATGC GGGATAGATT CTCGAAAGAT GAATTCTCGC GCATGATGTC GTTCGTGATT
CTGGTCATGA CGGTGGCACC GCTGCTAGCG CCGATCATCG GCGGCGCGTT GTTGTTCTGG
CTTAGCTGGC ACGCCATCTT TTGGACGATA GCCGCGGCAT CGCTGGTGGC GACGGTGCTG
GTGTGGCTGT TTGTGCATGA AACCTTGCCG GCCGAGCAGC GACAGCCTTT CCGTTTGCGT
ACTACGGTGA GGAATTTTTT CCAGTTAGTG CGTCATCGCC GTGTTTTCAG TTATATGTTT
GCCAGCGGAC TGTCGTTTTC GGGGATGTTT GCTTTTTTGA GCGCCGGGCC GTTTGTCTAC
ATCGACCTGA ATGGCGTATC ACCCCAACAC TTTGGTTACT ATTTTGCGCT GAATATCGTG
TTCCTGTTTT TGATGACCTT GCTCAATAGC CGCATTGTGT CGCGTATGGG GGCGATGTTC
ATGTTCCGGT TGGGGCTGCT TATCCAATTT ATGATGGGGA TATGGCTGGT GGCGGTTTGT
AGCTTTCATC TGGGGTTTAT CCCGCTGGTG TTTGGCGTGG CGGTATTCGT CGGGTGCGTC
GCGACGGTGG CGTCTAATGC CATGGCGGTG ATTCTTGATG ATTTCCCGCA TATGGCCGGG
ACGGCCTCCT CACTGGCGGG TACGATGCGT TTCGGGTTGG GGTCGCTGGT AGGGACGTTG
TTGTCGCTGG CTACTTTCCA AAGTCCCTGG CCGATGGTGG GCGCTATGGC GTTCTGTTCA
ACCGGCGCAT TCGGTTTATT TCTGTACGCA GGCCGCCGCT AA
 
Protein sequence
MPSPSSSRVG LIFILGLISM LMPIAIDMYL PALPVIAKEF SVDPGRVQMT LSSYVLGFAI 
GQIFYGPMSD SIGRKPVILG GVLVFTLAAA ACALSQTVDQ LIHMRFLHGL SAASASVVIN
ALMRDRFSKD EFSRMMSFVI LVMTVAPLLA PIIGGALLFW LSWHAIFWTI AAASLVATVL
VWLFVHETLP AEQRQPFRLR TTVRNFFQLV RHRRVFSYMF ASGLSFSGMF AFLSAGPFVY
IDLNGVSPQH FGYYFALNIV FLFLMTLLNS RIVSRMGAMF MFRLGLLIQF MMGIWLVAVC
SFHLGFIPLV FGVAVFVGCV ATVASNAMAV ILDDFPHMAG TASSLAGTMR FGLGSLVGTL
LSLATFQSPW PMVGAMAFCS TGAFGLFLYA GRR