Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_2437 |
Symbol | |
ID | 8120077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 2791842 |
End bp | 2793023 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644852821 |
Product | bicyclomycin/multidrug efflux system |
Protein accession | YP_003004757 |
Protein GI | 251790036 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.413789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCATCAC CCTCATCTTC GCGCGTCGGT CTGATTTTTA TCCTGGGATT AATATCGATG CTGATGCCTA TCGCCATCGA TATGTATTTG CCGGCGTTGC CGGTGATTGC CAAAGAGTTT TCGGTCGATC CGGGCCGTGT GCAGATGACG CTCAGTTCAT ATGTGCTCGG TTTCGCTATT GGTCAGATCT TTTACGGCCC GATGTCGGAC AGCATCGGGC GTAAGCCGGT GATTCTGGGC GGGGTTCTGG TCTTTACGCT GGCGGCCGCA GCCTGTGCCT TGTCGCAAAC GGTCGACCAA CTGATTCATA TGCGCTTTCT GCATGGCCTG TCGGCGGCTT CAGCCAGTGT GGTTATCAAT GCGCTGATGC GGGATAGATT CTCGAAAGAT GAATTCTCGC GCATGATGTC GTTCGTGATT CTGGTCATGA CGGTGGCACC GCTGCTAGCG CCGATCATCG GCGGCGCGTT GTTGTTCTGG CTTAGCTGGC ACGCCATCTT TTGGACGATA GCCGCGGCAT CGCTGGTGGC GACGGTGCTG GTGTGGCTGT TTGTGCATGA AACCTTGCCG GCCGAGCAGC GACAGCCTTT CCGTTTGCGT ACTACGGTGA GGAATTTTTT CCAGTTAGTG CGTCATCGCC GTGTTTTCAG TTATATGTTT GCCAGCGGAC TGTCGTTTTC GGGGATGTTT GCTTTTTTGA GCGCCGGGCC GTTTGTCTAC ATCGACCTGA ATGGCGTATC ACCCCAACAC TTTGGTTACT ATTTTGCGCT GAATATCGTG TTCCTGTTTT TGATGACCTT GCTCAATAGC CGCATTGTGT CGCGTATGGG GGCGATGTTC ATGTTCCGGT TGGGGCTGCT TATCCAATTT ATGATGGGGA TATGGCTGGT GGCGGTTTGT AGCTTTCATC TGGGGTTTAT CCCGCTGGTG TTTGGCGTGG CGGTATTCGT CGGGTGCGTC GCGACGGTGG CGTCTAATGC CATGGCGGTG ATTCTTGATG ATTTCCCGCA TATGGCCGGG ACGGCCTCCT CACTGGCGGG TACGATGCGT TTCGGGTTGG GGTCGCTGGT AGGGACGTTG TTGTCGCTGG CTACTTTCCA AAGTCCCTGG CCGATGGTGG GCGCTATGGC GTTCTGTTCA ACCGGCGCAT TCGGTTTATT TCTGTACGCA GGCCGCCGCT AA
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Protein sequence | MPSPSSSRVG LIFILGLISM LMPIAIDMYL PALPVIAKEF SVDPGRVQMT LSSYVLGFAI GQIFYGPMSD SIGRKPVILG GVLVFTLAAA ACALSQTVDQ LIHMRFLHGL SAASASVVIN ALMRDRFSKD EFSRMMSFVI LVMTVAPLLA PIIGGALLFW LSWHAIFWTI AAASLVATVL VWLFVHETLP AEQRQPFRLR TTVRNFFQLV RHRRVFSYMF ASGLSFSGMF AFLSAGPFVY IDLNGVSPQH FGYYFALNIV FLFLMTLLNS RIVSRMGAMF MFRLGLLIQF MMGIWLVAVC SFHLGFIPLV FGVAVFVGCV ATVASNAMAV ILDDFPHMAG TASSLAGTMR FGLGSLVGTL LSLATFQSPW PMVGAMAFCS TGAFGLFLYA GRR
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