Gene Dd1591_2435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2435 
Symbol 
ID8120075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2789460 
End bp2791052 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content58% 
IMG OID644852819 
ProductABC transporter related 
Protein accessionYP_003004755 
Protein GI251790034 
COG category[R] General function prediction only 
COG ID[COG4172] ABC-type uncharacterized transport system, duplicated ATPase component 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCAC AACCTTTACT TGAAATTCGC GACCTGAGCA TTGCCTTTCG CAACGGCGGC 
CAGCAGCGGC AAGTGGTCGA CCAGGTCTCA TTCAGCGTTG AAACCGGTGA AACGCTGGCG
CTGGTCGGTG AATCCGGCTC CGGCAAAAGC GTCACCGCGC TATCGGTGTT GCGTTTACTG
CCTTCGCCGC CGGTCGTCTA CCCGCAGGGC GACATTTTAT TTGCCGGCGA ATCGTTGCTA
AACGCCGATG AACAGCGGTT GCGCCAGTTG CGCGGCGATC GAATCGCGAT GATTTTTCAG
GAGCCGATGG TATCACTCAA CCCGCTGCAT ACCATCGAAA AACAGTTGGC GGAAGTACTG
GTGTTGCATC GGGGAATGCG CCATGAAGCC GCCCGGGGCG AGATCATCGG TTGTCTTGAA
CGCGTCGGGA TTCGTCAGGC GGCACGACGG CTGGCGGATT TTCCCCATCA ACTTTCCGGC
GGCGAACGCC AGCGGGTGAT GATCGCCATG GCATTGCTGA CGCAACCCGC TCTGTTAATC
GCCGATGAAC CGACTACCGC GCTGGACGTC ACCGTACAGG CGCAAATTCT GGATCTGCTC
AATGAACTGA AGCAGGAACT GAATATGAGT TTGCTGTTCA TTACGCATAA CCTGAACATT
GTGCGCCGAT TTGCAGACCG GGTCGTGGTG ATGCAGGCCG GACGCTGCGT CGAGCAGAAC
CGCACCCACG CGTTGTTCAG CACGCCGCAG CACGCTTACA CCCGGCAGTT ACTGGATGCC
GAGCCGGCCG GAGAAGCCCA GCCGCTGGAG CAGGAGGCGT CAACGCTGTT GGATGTCCGG
GAACTGGGCG TCAGCTTCCC CATCAAACGT GGCCTGTTGC GCCGCACCGT AGGGGAAAAA
TCGGTGCTAC AGGCGCTCAG TTTTAGTCTG CGCCGCGGCG AAAGCATCGG GCTGGTGGGC
GAATCCGGTT CCGGCAAAAG CACCACCGGG CTGGCACTGC TGCGTTTGCT ACGCAGCAGT
GGCGAGATCT GGTTCGATGG TCAACCGCTG CACCGCTTTA ACCGCAAGCA GATGCTGCCG
TTTCGTCGCC GTATTCAGGT GGTATTTCAG GATCCCAACG GTTCGCTGAA TCCCCGTTTA
AATGTAGAAC AGATTATTGC CGAAGGGCTA CGGGTACATT ACCCGTTAAG CGCGGCGGAA
CAGACGCAGC GGGTGATTCA GGCGATGCAG GAAGTCGGGC TGGACCCGGA CAGCCGTCAT
CGCTATCCGT CGGAGTTTTC CGGCGGCCAA CGGCAACGTA TCGCTATCGC CCGGGCACTG
ATCCTACAGC CGGAACTGCT GATTCTCGAT GAACCCACCT CATCGCTTGA TCGCACCGTC
CAGGCGCAGA TTCTGGCGTT ACTCAAAACC CTGCAACAGA CCCATCAACT GGCTTATCTG
TTCATCAGTC ACGATCTGCA CGTGGTACGC TCGCTGTGCC ATCAGGTGAT TGTACTGCGG
CACGGCGAAG TCGTAGAGCA AGGCGATTGT CGGCAGATCT TTGAACACCC GCAGCAGGAC
TACACCCGGC AATTGCTACG GTTATCCGCC TGA
 
Protein sequence
MSAQPLLEIR DLSIAFRNGG QQRQVVDQVS FSVETGETLA LVGESGSGKS VTALSVLRLL 
PSPPVVYPQG DILFAGESLL NADEQRLRQL RGDRIAMIFQ EPMVSLNPLH TIEKQLAEVL
VLHRGMRHEA ARGEIIGCLE RVGIRQAARR LADFPHQLSG GERQRVMIAM ALLTQPALLI
ADEPTTALDV TVQAQILDLL NELKQELNMS LLFITHNLNI VRRFADRVVV MQAGRCVEQN
RTHALFSTPQ HAYTRQLLDA EPAGEAQPLE QEASTLLDVR ELGVSFPIKR GLLRRTVGEK
SVLQALSFSL RRGESIGLVG ESGSGKSTTG LALLRLLRSS GEIWFDGQPL HRFNRKQMLP
FRRRIQVVFQ DPNGSLNPRL NVEQIIAEGL RVHYPLSAAE QTQRVIQAMQ EVGLDPDSRH
RYPSEFSGGQ RQRIAIARAL ILQPELLILD EPTSSLDRTV QAQILALLKT LQQTHQLAYL
FISHDLHVVR SLCHQVIVLR HGEVVEQGDC RQIFEHPQQD YTRQLLRLSA