| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2433 |
|---|
| Symbol | |
|---|
| ID | 8120073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 2787339 |
|---|
| End bp | 2788436 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644852817 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003004753 |
|---|
| Protein GI | 251790032 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGAACTT ACCTGTTACG TCGATTATTG CTGGTGATCC CCACGCTGTG GGCCATCATC
ACCATTAACT TTTTTATTGT GCAAATAGCG CCGGGCGGCC CGGTCGACCA GGCCATCGCC
TCCATTGAAA TGGGCCAGGG CAGCGGTTTC GGCGCCGGCG GAAACGACGG CGGCGGGCTG
GCGCGTGGGC CGGGCGGCGG AAAGCCGTCG GTGGAAAATA CCTACCGCGG CGCGCGTGGG
CTGGACCCGG AGGTGATCGC CGAAATCACC AAACGCTATG GTTTTGATAA ACCGCTGCAC
GAGCGTTACG TCAAACTGCT TTGGGACTAC GTACGGTTTG ACTTCGGCAA CAGCCTGTTT
CGCGGATCAT CGGTCATCGC ACTGATCAAA GAGAGTATGC CGGTTTCTAT ATCCCTTGGG
CTGTGGAGTA CGTTGATTAT CTATCTGGTT TCCATTCCAC TCGGCATTAA AAAAGCGGTA
CGCAACGGCT CCGCCTTTGA CGTCTGGAGC AGCACGCTGA TCATTGTCGG ATACGCTATT
CCCGCGTTTC TGTTCGCGAT TCTGCTGATC GTCGTGTTCG CCGGTGGCAG TTATCTGGAC
TGGTTCCCGC TACGCGGGTT GGTATCGCCG CATTTTGATA GCCTGTCCTG GTTCGATAAG
ATCATCGATT ATCTGTGGCA TATCGCACTG CCGGTGCTGG CGACGGTGAT TGGCGGCTTC
GCCACGCTGA CCATGCTCAC CAAGAACTCA TTTCTGGATG AAATCCGCAA ACAATACGTG
ATCACCGCCC GCGCCAAAGG GCTGGATGAG AAAAAAATTC TCTATCGCCA CGTGTTTCGC
AACGCCATGT TACTGGTGAT CGCCGGTTTC CCCGCCACCT TCATCAGTAT GTTTTTTACC
GGCTCGCTAT TGATCGAAGT GATGTTCTCC CTCAACGGCC TCGGGCTACT GGGGTACGAC
GCCACGTTGC AACGCGATTA CCCGGTGATG TTCGGCACGC TATACATTTT TACCCTCATC
GGCCTGCTGC TGAACATTCT CAGCGACATG ACCTATACGC TGGTTGACCC GCGTATCGAC
TTCGAGGAGC GCCAATGA
|
|---|
| Protein sequence | MGTYLLRRLL LVIPTLWAII TINFFIVQIA PGGPVDQAIA SIEMGQGSGF GAGGNDGGGL
ARGPGGGKPS VENTYRGARG LDPEVIAEIT KRYGFDKPLH ERYVKLLWDY VRFDFGNSLF
RGSSVIALIK ESMPVSISLG LWSTLIIYLV SIPLGIKKAV RNGSAFDVWS STLIIVGYAI
PAFLFAILLI VVFAGGSYLD WFPLRGLVSP HFDSLSWFDK IIDYLWHIAL PVLATVIGGF
ATLTMLTKNS FLDEIRKQYV ITARAKGLDE KKILYRHVFR NAMLLVIAGF PATFISMFFT
GSLLIEVMFS LNGLGLLGYD ATLQRDYPVM FGTLYIFTLI GLLLNILSDM TYTLVDPRID
FEERQ
|
|---|
| |