Gene Dd1591_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2417 
Symbol 
ID8120829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2768624 
End bp2769811 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content60% 
IMG OID644852801 
Productsugar efflux transporter 
Protein accessionYP_003004737 
Protein GI251790016 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCCG CTTCTCCCTC GCGCGCCACC GCCTGGCTGC GCGTGGTCAC ATTGGCTATC 
GCCGCGTTTA TTTTCAATAC CACGGAATTT ATTCCGGTGG GGCTGCTGAG CGATATCGCC
AACACCTTTG CCATGAAAAC CGAAGATGTC GGCTTGATGA TTACCATTTA TGCCTGGATC
GTGGCGGTGG CTTCGCTGAT CTGTATGTTG TTGACCAGCG GCATTGAGCG CCGCAAATTG
CTGATTGGCC TGTTTAGTCT GTTCATCATC AGCCATCTGC TGTCTGCCGT TGCCTGGAAC
TTTACCGTGC TGGTCATTTC CCGCGCCGGG GTTGCGCTGG CGCACTCGGT ATTCTGGTCG
ATTACCGCCT CGCTGGCGAT TCGTATGGCG CCTCCCGGCA AACGCGCGCA GGCATTGGGG
TTAATTGCCA CCGGGTCGTC GCTGGCGATG GTGCTGGGGC TGCCGTTGGG GCGGGTTATC
GGTCAGTACC TTGGTTGGCG CATTACGTTT CTGACCATCG CCGTCGGCGC GGCCGTTGCC
ATGGTTCTGC TGGCGCGCTT ACTGCCGCGC CTGCCGAGCG AGCATTCCGG TTCACTGTCC
AGCGTACCGA AGTTGTTCCG CCGCCCGGCG CTGGTCGGCG TTTATCTGCT GACTGTGGCC
GTGGTGACCG CGCACTTCAC CGCTTACAGT TACATTGAGC CGTTCATCCA GACGGTGGCC
CGGCTGCCTG AAAACTTCAC CACCCTGATT CTGTTGCTGT TCGGTTGCGC CGGGATTGTC
GGCAGTATGC TTTACAGCCG CTACAGCGAA CGTTTTCCCC TCGCATTTCT GTTTACCGCC
ATGCTGCTGT TGCTCAGTTG CCTGATGCTG TTGATGCCGT TGTCCGGTTA CCCGTTCGGC
CTGACATTGC TGTGCCTGGT GTGGGGACTG GCGATGATGG CGATAGGGCT GGCGATGCAG
GCCAAAGTGC TGGCGCTGGC GCCGGATGCC AGCGATGTCG CCATGTCGAT TTTCTCCGGG
TTGTTCAATC TCGGTATCGG CGGCGGCGCG CTACTGGGCA GCCAGGTGAG CCTGCATCTG
GGAATGGACA AAATCGGTTA TGTCGGCGCG CCGCTGGTGC TGGTGGCGCT GTTCGCCACC
CTGCTCAGCG TCTACCGCAA TGTGCGGCTG GTGCACTCCC GTATTTAA
 
Protein sequence
MTSASPSRAT AWLRVVTLAI AAFIFNTTEF IPVGLLSDIA NTFAMKTEDV GLMITIYAWI 
VAVASLICML LTSGIERRKL LIGLFSLFII SHLLSAVAWN FTVLVISRAG VALAHSVFWS
ITASLAIRMA PPGKRAQALG LIATGSSLAM VLGLPLGRVI GQYLGWRITF LTIAVGAAVA
MVLLARLLPR LPSEHSGSLS SVPKLFRRPA LVGVYLLTVA VVTAHFTAYS YIEPFIQTVA
RLPENFTTLI LLLFGCAGIV GSMLYSRYSE RFPLAFLFTA MLLLLSCLML LMPLSGYPFG
LTLLCLVWGL AMMAIGLAMQ AKVLALAPDA SDVAMSIFSG LFNLGIGGGA LLGSQVSLHL
GMDKIGYVGA PLVLVALFAT LLSVYRNVRL VHSRI