| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2415 |
|---|
| Symbol | |
|---|
| ID | 8120827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 2765946 |
|---|
| End bp | 2767457 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644852799 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003004735 |
|---|
| Protein GI | 251790014 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.543063 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATAA ACCCGCGCTC GCGTCTGGAA ATGCGCTACA TTTCCATCTC TTTTGCCGGA
TTTCCCGCCC TCAGACAGGT GAATTTCACA CTGGAAGGTG GGTCTATCCA CGCGCTGACC
GGCGCCAACG GCGCGGGAAA ATCCACGCTG ATGGCGATTC TTTCCGGCTC TTATGACCAT
TACAGCGGAG ATATCCTGCT GGATGGCGAA AAAGTCTCGA TTCATTCCCC CCGCGACGCC
AAACGTTATG GTATTCATCT GGTGCAGCAG GAAGTGGACG CCGCGCTGGT GCCCACGCTG
TCGGTAGCGG AAAACATCAT GCTGGACCAG TTGGCGGAAA GCGGCCATGT GTTCAACTGG
GCGGCGCTCT ATCAGCAGGC GCAGGCACTG CTAACGCAGC TAGGAGTCAG CATCAACGTT
CGCCGGCGAC TGGAGCAGTG CACGCTGGCG GAAAAACAAC AAATTCTGCT GGCACGCGCC
TTATCCCACC GTTGCCGCTT TCTGATTCTG GATGAGCCTA CCGCGCCGCT GGACCAGGAA
GAAAGCGCCC GCTTATTTGC GGTCGTGCGC CGTCTGCAAC AAGACGGGAT CGGCATTGTC
TTTATTTCAC ACCGCATTCA CGAACTGAAG GCCATTTGCG ATACGTTGAC CGTGCTGCGC
GACGGGCAGT TCGTCAGCAG CGGTCCGATG GCGGGCCTCA GCGGCGGCGA AATCGTCGAA
CGGATGCTGG GCCATCGACT GGATGATATT TACCCGCCCC GCCGCCCACG TCATGACGGC
GACATCCTGT TGCAGGTAGA CGGCCTGCAT GACGACACGC TACTGCACAA TATCTCATTG
CGGTTACGTC AGGGCGAAAT TCTCGGCATC GCCGGCCTTG CCGGTGCGGG TAAAACCGAA
CTGTGTAAAG CGCTGTTCGG CGCTGCCCGC AGTCGGGTTG CCTCCGGGCG TTATCAGGGG
CGCGCCTGGC GCCCTACCTC GCCCGCCGAC GCCGTGCAGC AAGGTATCGC ACTAGTGCCG
GAGGAACGAC GCAAAGAAGG CATTTTTATT GACGAATCCA TCACCATGAA TCTCAGCATC
AGCGCCAGCG ACAGTTTCTC CCGCTATGGC ATTTTCGGGC ATGGCCAGGC GCTGGCCTGG
GCCCACAACC TGATCCAGCG GCTGACCATC CGCACCAGCG GGCCGCAACA GCGGTTGCGA
CGCCTGTCGG GCGGTAATCA GCAAAAGGTG GCGATCGGCA AATGGTTACG CAGCGACGTG
CAGGTATTGA TTCTGGATGA GCCCACCAAA GGCGTGGATA TCAAAGCCAA GCAGGATCTG
TTCACGTTGA TCGACTCACT GGCGAGACAA GGCAAGGGCG TGATTTATGC TTCCGGCGAA
TTCTCCGAAC TGCTCGGGCT GTGTGATCGC ATCTGCGTGC TGTGGGACGG CCGCATCGTC
GCCGAACTGG ACGGCGCAGA CGCCGATGAA GAGACGTTGT TACTTTATTC AACCGGAGGA
ACTCCCGCGT GA
|
|---|
| Protein sequence | MPINPRSRLE MRYISISFAG FPALRQVNFT LEGGSIHALT GANGAGKSTL MAILSGSYDH
YSGDILLDGE KVSIHSPRDA KRYGIHLVQQ EVDAALVPTL SVAENIMLDQ LAESGHVFNW
AALYQQAQAL LTQLGVSINV RRRLEQCTLA EKQQILLARA LSHRCRFLIL DEPTAPLDQE
ESARLFAVVR RLQQDGIGIV FISHRIHELK AICDTLTVLR DGQFVSSGPM AGLSGGEIVE
RMLGHRLDDI YPPRRPRHDG DILLQVDGLH DDTLLHNISL RLRQGEILGI AGLAGAGKTE
LCKALFGAAR SRVASGRYQG RAWRPTSPAD AVQQGIALVP EERRKEGIFI DESITMNLSI
SASDSFSRYG IFGHGQALAW AHNLIQRLTI RTSGPQQRLR RLSGGNQQKV AIGKWLRSDV
QVLILDEPTK GVDIKAKQDL FTLIDSLARQ GKGVIYASGE FSELLGLCDR ICVLWDGRIV
AELDGADADE ETLLLYSTGG TPA
|
|---|
| |