| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2394 |
|---|
| Symbol | |
|---|
| ID | 8120806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 2739157 |
|---|
| End bp | 2739927 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644852778 |
|---|
| Product | DNA-binding transcriptional repressor DeoR |
|---|
| Protein accession | YP_003004714 |
|---|
| Protein GI | 251789993 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACGC GTCGCGCAGC AAGGCTCAAC AAACTGGCTC AGGCTTTAAA AAAAGCCGAC
AAACTGCATC TCAAGGATGC AGCCCAACTG CTTGGCGTCT CTGAAATGAC GGTTCGGCGT
GATCTGAGCG CGAACCCAGA TGCATCGGTG GTGTTGTTGG GTGGCTACGT GGTTTGCGAC
CCGAAAACCA ACGGCGCCAC CAATTATTTT GTTTCCGATC AGCAGACAAA GCATGTGGTA
GAAAAAAATA TCGTGGGAGA ATTGGCCGCC GCCTGCATTG AGCCCAACGA CACCCTGTTC
TTCGACTGCG GCACCACGAT ACCTTTTATC ATCGCCGCTA TTCCGGATGA CCTGCCGTTT
ACCGGTATCT GTTATTCGCT CAATACCTTT CTGGCGCTGC AAGACAAACC AAATGGCCGG
GTAATCCTGT GTGGTGGAGA ATTTCATCCT GACAACGCGA TCTTCACCCC GCTGGGGCAT
CAACATGAGC TTGACCAAAT CTGCCCGACC AAAGCCTTCA TTTCAGCAGG AGGCATCGAC
CCGGAGGCTG GCGCGACCTG TTTTAATTTC GCCGAACTGG CGATGAAACA CCGAGCCATG
ACGTTGTCTC AGCGGGTCAT TTTAACCGCA GATGCCAGTA AATTCGGCAA GCGCAAACCT
GCTCGCATCG GTGCGTTAAC CTTGTTTGAT TCGCTGATCA CTAACCGTAC GCCGGACTCG
GATTGCGTGA ACTACCTCAA AGCCAACAAT ATCCAGTTAT TGACGCCGTA A
|
|---|
| Protein sequence | METRRAARLN KLAQALKKAD KLHLKDAAQL LGVSEMTVRR DLSANPDASV VLLGGYVVCD
PKTNGATNYF VSDQQTKHVV EKNIVGELAA ACIEPNDTLF FDCGTTIPFI IAAIPDDLPF
TGICYSLNTF LALQDKPNGR VILCGGEFHP DNAIFTPLGH QHELDQICPT KAFISAGGID
PEAGATCFNF AELAMKHRAM TLSQRVILTA DASKFGKRKP ARIGALTLFD SLITNRTPDS
DCVNYLKANN IQLLTP
|
|---|
| |