Gene Dd1591_2383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_2383 
Symbol 
ID8120795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2728773 
End bp2729618 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content59% 
IMG OID644852767 
Productputrescine transporter subunit: membrane component of ABC superfamily 
Protein accessionYP_003004703 
Protein GI251789982 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAATT TACCGGTCGT GCGTTCGCCG TGGCGTACGC TGATTCTGGT GCTGGGATAC 
AGTTTCCTGT ATGCGCCGAT GCTGATGCTG GTGATTTACT CCTTCAACAG TTCGCGGTTG
GTGACGGTGT GGGCCGGCTG GTCTACCCAG TGGTACAGCG CGCTGTTCGA GGATTCGGCG
ATGATCAGCG CGGTCTTGCT CAGCCTGACT ATCGCGGCGG CCTCAGCCAC TATGGCGGTG
GTGCTGGGAA CGCTGGCGGC GGTGGTGATG GTGCGCTTCG GCAATTTCCG CGGTTCCAAT
GGTTTTGCTT TTATGCTGAC CGCGCCGCTG GTCATGCCGG ATGTGATTAC CGGGTTGTCG
CTGCTGCTGC TGTTTGTATC GCTGGCGCAG GCTATCGGCT GGCCGGCGGA ACGCGGCATG
TTGACCATCT GGCTGGCGCA CGTCACCTTC TGTTCGGCGT ATGTCACCGT GGTCGTCAGC
GCTCGCCTGC GCGAACTGGA TCATTCGATT GAAGAGGCGG CGATGGATCT GGGGGCGACG
CCGCTGAAGG TGTTCTTCAT TATCACCGTG CCGATGATAG CTCCGGCGCT GGTTTCCGGC
TGGCTGCTGG CCTTTACCCT GTCGCTGGAT GACCTGGTGA TTGCCAGCTT CGTCTCTGGT
CCCGGTGCGA CCACCTTGCC GATGCTGGTT TTCTCCAGCG TAAGAATGGG CGTTAACCCG
CAGATTAACG CGCTGGCCTC TCTGATATTG TTGGTGGTAG GCATTATCGG TTTGATTGCC
TGGTGGTTTA TGGCCAGGGC GGAAAAGCAG CGTCAACGCG ATTTGCAAAA AGCAAGGCGT
GGCTGA
 
Protein sequence
MNNLPVVRSP WRTLILVLGY SFLYAPMLML VIYSFNSSRL VTVWAGWSTQ WYSALFEDSA 
MISAVLLSLT IAAASATMAV VLGTLAAVVM VRFGNFRGSN GFAFMLTAPL VMPDVITGLS
LLLLFVSLAQ AIGWPAERGM LTIWLAHVTF CSAYVTVVVS ARLRELDHSI EEAAMDLGAT
PLKVFFIITV PMIAPALVSG WLLAFTLSLD DLVIASFVSG PGATTLPMLV FSSVRMGVNP
QINALASLIL LVVGIIGLIA WWFMARAEKQ RQRDLQKARR G