| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2374 |
|---|
| Symbol | |
|---|
| ID | 8120786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 2721445 |
|---|
| End bp | 2722314 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644852758 |
|---|
| Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
|---|
| Protein accession | YP_003004694 |
|---|
| Protein GI | 251789973 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGCC CGGTTATCGG GCCGGCGTGG CGGAGCGTGG CCTTGGTTGT GCTGACGCTG
CTGGCGGGCT GCCAGACGCG TGAACGTTAT GTTGATGAGG GGGATTACCA ACTGGATCTG
TCGTCTCCGG CTATCAGCCG GGGGGAACGG GTTCGTTTTC TGGTATTTCA CTACACGGCT
GAAAACCTGA GCACTTCGTT GGAAACGCTT ACCACCGGCC ATGTCAGTGC GCATTATTTG
GTGCCGGCGT ATCCGCGGCA GGTCAATGGC AAGCCCGTCG CGTGGAAACT GGTGCCGGAG
TCGCAAGCGG CCTGGCACGC CGGCGGCAGC TACTGGCGAG GTTACAGCCA GTTGAACGCG
ACATCTGTCG GTATCGAGCA GGAAAACCCC GGCTGGCGTC AGACCGCGTT GGGCACTTAC
TGGTGGCAAC CCTATACGCC GCAACAGATT ACGTTGGTAA CCCACCTTGC CCGCGACATC
ATTGCCCGCC ATCATATTGC GCCGCAGAAT GTAGTGGGGC ATAGCGATAT CGCTCCCCAA
CGCAAGGTCG ACCCAGGGCC GTTGTTTCCC TGGCGTCAAC TGGCGCTGGC GGGAATTGGT
GCCTGGCCGG ATGCACAACG CGTCCGCTTC TATCTGGGAG ATAAACAGAC ATATACACCG
GCAGACAGAG GCGCGTTGCT GAAGAAACTG GCGTGTTATG GCTATGAGGT CAACCCAGGC
ATGAGCGAAG ATCAGCAGCA GCGCGTCGTG GCGGCATTCC AAATGCACTT CCGGCAACAG
CGTTATGACG GCGACGCCGA CGCCGAAACT GAAGCGATTG CCGACGCATT GCTGGAAAAA
TACGGCGGGT CCTGCAAAGG AGCGACATGA
|
|---|
| Protein sequence | MNRPVIGPAW RSVALVVLTL LAGCQTRERY VDEGDYQLDL SSPAISRGER VRFLVFHYTA
ENLSTSLETL TTGHVSAHYL VPAYPRQVNG KPVAWKLVPE SQAAWHAGGS YWRGYSQLNA
TSVGIEQENP GWRQTALGTY WWQPYTPQQI TLVTHLARDI IARHHIAPQN VVGHSDIAPQ
RKVDPGPLFP WRQLALAGIG AWPDAQRVRF YLGDKQTYTP ADRGALLKKL ACYGYEVNPG
MSEDQQQRVV AAFQMHFRQQ RYDGDADAET EAIADALLEK YGGSCKGAT
|
|---|
| |